PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

1873
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Gbil01G0000080.1 Alkaloid T3O medium borderline
Gbil01G0000820.1 Alkaloid T3O low borderline
Gbil01G0001050.1 Alkaloid T3O medium borderline
Gbil01G0001290.1 Alkaloid T3O medium borderline
Gbil01G0001300.1 Alkaloid T3O medium borderline
Gbil01G0001440.1 Alkaloid T3O medium borderline
Gbil01G0003920.1 Alkaloid T3O medium borderline
Gbil01G0007860.1 Alkaloid T3O medium borderline
Gbil01G0011290.1 Alkaloid T3O low borderline
Gbil01G0014380.1 Alkaloid T3O medium pass
Gbil01G0015970.1 Alkaloid T3O medium borderline
Gbil01G0017280.1 Alkaloid T3O low borderline
Gbil01G0017510.1 Alkaloid T3O low borderline
Gbil01G0021650.1 Alkaloid T3O medium borderline
Gbil01G0021800.1 Alkaloid T3O medium pass
Gbil01G0030040.1 Alkaloid T3O medium pass
Gbil02G0000400.1 Alkaloid T3O medium pass
Gbil02G0005090.1 Alkaloid T3O medium borderline
Gbil02G0005780.1 Alkaloid T3O medium borderline
Gbil02G0007200.1 Alkaloid T3O medium borderline
Gbil02G0007230.1 Alkaloid T3O medium borderline
Gbil02G0007390.1 Alkaloid T3O medium borderline
Gbil02G0008140.1 Alkaloid T3O medium borderline
Gbil02G0008420.1 Alkaloid T3O medium pass
Gbil02G0009140.1 Alkaloid T3O medium borderline
Gbil02G0009150.1 Alkaloid T3O medium borderline
Gbil02G0013330.1 Alkaloid T3O medium borderline
Gbil02G0013390.1 Alkaloid T3O medium pass
Gbil02G0013580.1 Alkaloid T3O medium borderline
Gbil02G0014400.1 Alkaloid T3O medium borderline
Gbil02G0014450.1 Alkaloid T3O medium borderline
Gbil02G0014470.1 Alkaloid T3O medium borderline
Gbil02G0014490.1 Alkaloid T3O medium borderline
Gbil02G0014590.1 Alkaloid T3O medium borderline
Gbil02G0014600.1 Alkaloid T3O medium borderline
Gbil02G0014800.1 Alkaloid T3O medium borderline
Gbil02G0014810.1 Alkaloid T3O medium borderline
Gbil02G0015120.1 Alkaloid T3O medium borderline
Gbil02G0017160.1 Alkaloid T3O medium borderline
Gbil02G0017190.1 Alkaloid T3O medium borderline
Gbil02G0019670.1 Alkaloid T3O medium pass
Gbil02G0019700.1 Alkaloid T3O medium pass
Gbil02G0021910.1 Alkaloid T3O medium borderline
Gbil03G0000630.1 Alkaloid T3O medium borderline
Gbil03G0000830.1 Alkaloid T3O medium borderline
Gbil03G0000840.1 Alkaloid T3O medium borderline
Gbil03G0011520.1 Alkaloid T3O medium borderline
Gbil03G0011670.1 Alkaloid T3O medium pass
Gbil03G0011680.1 Alkaloid T3O medium pass
Gbil03G0012530.1 Alkaloid T3O medium borderline