PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

1873
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Gbil03G0018000.1 Alkaloid T3O medium borderline
Gbil03G0018190.1 Alkaloid T3O medium pass
Gbil03G0018860.1 Alkaloid T3O low borderline
Gbil03G0020240.1 Alkaloid T3O medium borderline
Gbil03G0020250.1 Alkaloid T3O medium borderline
Gbil03G0021430.1 Alkaloid T3O medium borderline
Gbil03G0021440.1 Alkaloid T3O medium borderline
Gbil03G0021450.1 Alkaloid T3O medium borderline
Gbil04G0014490.1 Alkaloid T3O low borderline
Gbil04G0015470.1 Alkaloid T3O low borderline
Gbil04G0015530.1 Alkaloid T3O low borderline
Gbil04G0017940.1 Alkaloid T3O low borderline
Gbil04G0017950.1 Alkaloid T3O low borderline
Gbil04G0018200.1 Alkaloid T3O medium pass
Gbil05G0004110.1 Alkaloid T3O medium borderline
Gbil05G0005970.1 Alkaloid T3O medium borderline
Gbil05G0005980.1 Alkaloid T3O medium borderline
Gbil05G0005990.1 Alkaloid T3O medium borderline
Gbil05G0006400.1 Alkaloid T3O medium borderline
Gbil05G0006830.1 Alkaloid T3O medium pass
Gbil05G0006840.1 Alkaloid T3O medium pass
Gbil05G0006960.1 Alkaloid T3O low borderline
Gbil05G0006970.1 Alkaloid T3O medium pass
Gbil05G0007870.1 Alkaloid T3O medium borderline
Gbil05G0007920.1 Alkaloid T3O medium borderline
Gbil05G0007960.1 Alkaloid T3O medium pass
Gbil05G0007980.1 Alkaloid T3O medium pass
Gbil05G0008010.1 Alkaloid T3O medium borderline
Gbil05G0011660.1 Alkaloid T3O low borderline
Gbil05G0011710.1 Alkaloid T3O medium pass
Gbil05G0012470.1 Alkaloid T3O medium pass
Gbil05G0012780.1 Alkaloid T3O medium borderline
Gbil05G0012810.1 Alkaloid T3O medium borderline
Gbil05G0012820.1 Alkaloid T3O medium borderline
Gbil05G0013460.1 Alkaloid T3O medium pass
Gbil05G0013470.1 Alkaloid T3O medium pass
Gbil05G0017110.1 Alkaloid T3O medium borderline
Gbil05G0019570.1 Alkaloid T3O medium borderline
Gbil05G0020840.1 Alkaloid T3O medium borderline
Gbil06G0002090.1 Alkaloid T3O medium pass
Gbil06G0004280.1 Alkaloid T3O medium borderline
Gbil06G0005190.1 Alkaloid T3O medium pass
Gbil06G0005200.1 Alkaloid T3O medium pass
Gbil06G0005310.1 Alkaloid T3O medium pass
Gbil06G0005930.1 Alkaloid T3O medium borderline
Gbil06G0012230.1 Alkaloid T3O medium borderline
Gbil06G0020960.1 Alkaloid T3O low borderline
Gbil06G0022360.1 Alkaloid T3O medium pass
Gbil07G0001160.1 Alkaloid T3O medium pass
Gbil07G0001170.1 Alkaloid T3O medium pass