PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

2037
Candidate Protein Records
1873
Pathway-Level Records
4596
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Gbil10G0012540.1 Phenylpropanoid COMT medium pass
Gbil11G0007920.1 Phenylpropanoid COMT low borderline
Gbil11G0009320.1 Phenylpropanoid COMT low borderline
Gbil11G0011120.1 Phenylpropanoid COMT medium pass
Gbilctg250620001670.1 Phenylpropanoid COMT medium pass
Gbilctg250630001680.1 Phenylpropanoid COMT medium pass
Gbilctg372590001980.1 Phenylpropanoid COMT medium pass
Gbil01G0018780.1 Phenylpropanoid CSE medium pass
Gbil01G0025400.1 Phenylpropanoid CSE medium pass
Gbil01G0027900.1 Phenylpropanoid CSE medium pass
Gbil01G0027910.1 Phenylpropanoid CSE medium pass
Gbil01G0027920.1 Phenylpropanoid CSE medium pass
Gbil02G0005440.1 Phenylpropanoid CSE medium pass
Gbil02G0005450.1 Phenylpropanoid CSE medium pass
Gbil02G0005460.1 Phenylpropanoid CSE medium pass
Gbil02G0018410.1 Phenylpropanoid CSE medium pass
Gbil03G0004800.1 Phenylpropanoid CSE medium pass
Gbil04G0008980.1 Phenylpropanoid CSE medium pass
Gbil04G0010300.1 Phenylpropanoid CSE medium pass
Gbil05G0009890.1 Phenylpropanoid CSE medium pass
Gbil06G0004360.1 Phenylpropanoid CSE medium pass
Gbil06G0015650.1 Phenylpropanoid CSE medium pass
Gbil06G0015660.1 Phenylpropanoid CSE medium pass
Gbil07G0004800.1 Phenylpropanoid CSE medium pass
Gbil07G0017370.1 Phenylpropanoid CSE medium pass
Gbil08G0015730.1 Phenylpropanoid CSE medium pass
Gbil08G0015740.1 Phenylpropanoid CSE medium pass
Gbil08G0017270.1 Phenylpropanoid CSE medium pass
Gbil09G0017430.1 Phenylpropanoid CSE medium pass
Gbil10G0003330.1 Phenylpropanoid CSE medium pass
Gbil10G0003340.1 Phenylpropanoid CSE medium pass
Gbil10G0016660.1 Phenylpropanoid CSE medium pass
Gbil12G0008120.1 Phenylpropanoid CSE medium pass
Gbil12G0008160.1 Phenylpropanoid CSE medium pass
Gbil02G0014620.1 Phenylpropanoid F5H/CYP84A medium borderline
Gbil02G0014640.1 Phenylpropanoid F5H/CYP84A medium borderline
Gbil03G0012470.1 Phenylpropanoid F5H/CYP84A medium borderline
Gbil03G0012490.1 Phenylpropanoid F5H/CYP84A medium borderline
Gbil03G0012510.1 Phenylpropanoid F5H/CYP84A medium borderline
Gbil03G0012520.1 Phenylpropanoid F5H/CYP84A medium borderline
Gbil03G0012540.1 Phenylpropanoid F5H/CYP84A medium borderline
Gbil03G0012670.1 Phenylpropanoid F5H/CYP84A medium borderline
Gbil05G0013490.1 Phenylpropanoid F5H/CYP84A medium borderline
Gbil06G0007370.1 Phenylpropanoid F5H/CYP84A medium borderline
Gbil08G0017720.1 Phenylpropanoid F5H/CYP84A medium borderline
Gbilctg251580001700.1 Phenylpropanoid F5H/CYP84A medium borderline
Gbil01G0023090.1 Phenylpropanoid HCT medium pass
Gbil01G0027830.1 Phenylpropanoid HCT medium pass
Gbil01G0027850.1 Phenylpropanoid HCT medium pass
Gbil01G0027860.1 Phenylpropanoid HCT medium pass