PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

2037
Candidate Protein Records
1873
Pathway-Level Records
4596
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Gbil01G0032260.1 Phenylpropanoid LAC medium pass
Gbil01G0032450.1 Phenylpropanoid LAC medium pass
Gbil02G0016440.1 Phenylpropanoid LAC medium pass
Gbil03G0001370.1 Phenylpropanoid LAC medium pass
Gbil03G0001380.1 Phenylpropanoid LAC medium pass
Gbil03G0001390.1 Phenylpropanoid LAC medium pass
Gbil03G0001400.1 Phenylpropanoid LAC medium pass
Gbil03G0001590.1 Phenylpropanoid LAC medium pass
Gbil03G0012450.1 Phenylpropanoid LAC low borderline
Gbil04G0018770.1 Phenylpropanoid LAC medium pass
Gbil04G0019230.1 Phenylpropanoid LAC low borderline
Gbil05G0003770.1 Phenylpropanoid LAC medium pass
Gbil05G0003780.1 Phenylpropanoid LAC medium pass
Gbil06G0008960.1 Phenylpropanoid LAC low borderline
Gbil07G0002070.1 Phenylpropanoid LAC medium pass
Gbil07G0002080.1 Phenylpropanoid LAC medium pass
Gbil07G0002090.1 Phenylpropanoid LAC medium pass
Gbil07G0002100.1 Phenylpropanoid LAC medium pass
Gbil07G0003070.1 Phenylpropanoid LAC medium pass
Gbil09G0016540.1 Phenylpropanoid LAC low borderline
Gbil09G0017120.1 Phenylpropanoid LAC medium pass
Gbil09G0017130.1 Phenylpropanoid LAC medium pass
Gbil09G0017270.1 Phenylpropanoid LAC medium pass
Gbil09G0021710.1 Phenylpropanoid LAC medium pass
Gbil10G0016850.1 Phenylpropanoid LAC medium pass
Gbil11G0001760.1 Phenylpropanoid LAC low borderline
Gbil11G0002180.1 Phenylpropanoid LAC medium pass
Gbil11G0002190.1 Phenylpropanoid LAC medium pass
Gbil11G0002210.1 Phenylpropanoid LAC medium pass
Gbil11G0002240.1 Phenylpropanoid LAC medium pass
Gbil11G0002250.1 Phenylpropanoid LAC medium pass
Gbil11G0002260.1 Phenylpropanoid LAC low borderline
Gbil11G0004920.1 Phenylpropanoid LAC medium pass
Gbil11G0004930.1 Phenylpropanoid LAC medium pass
Gbil11G0004940.1 Phenylpropanoid LAC medium pass
Gbil11G0004950.1 Phenylpropanoid LAC medium pass
Gbil11G0004960.1 Phenylpropanoid LAC medium pass
Gbil11G0004970.1 Phenylpropanoid LAC medium pass
Gbil11G0004980.1 Phenylpropanoid LAC medium pass
Gbil11G0004990.1 Phenylpropanoid LAC medium pass
Gbil11G0005000.1 Phenylpropanoid LAC medium pass
Gbil11G0005020.1 Phenylpropanoid LAC medium pass
Gbil06G0001210.1 Phenylpropanoid PAL high pass
Gbil06G0002500.1 Phenylpropanoid PAL low borderline
Gbil08G0006970.1 Phenylpropanoid PAL high pass
Gbil08G0021630.1 Phenylpropanoid PAL high pass
Gbil09G0011580.1 Phenylpropanoid PAL low borderline
Gbil09G0016030.1 Phenylpropanoid PAL high pass
Gbil09G0016200.1 Phenylpropanoid PAL high pass
Gbil10G0005540.1 Phenylpropanoid PAL high pass