Ginkgo biloba (ginkgo_biloba)
Imported from atlas release summary for Ginkgo biloba.
1873
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1873
Candidate Genes
C4H
7.07%
C3'H/CYP98A
6.98%
CYP76
4.81%
BAHD
4.61%
4CL
4.31%
IFS
4.29%
UGT
3.63%
POD
3.61%
Other Families
60.68%
More Families (96)
7DLGT
161
3.5%
UFGT
159
3.46%
T3O
157
3.42%
DWF4/CYP90B1
155
3.37%
F3H
138
3.0%
BR6OX2/CYP85A2
97
2.11%
F3'H/CYP75B
91
1.98%
CODM/T6ODM
82
1.78%
CAD
74
1.61%
NMT
69
1.5%
TRI/TRII
62
1.35%
STR
61
1.33%
H6H
59
1.28%
IFR
51
1.11%
HCT
51
1.11%
T16H
50
1.09%
CAS
50
1.09%
COMT
46
1.0%
LAC
45
0.98%
G8O/G8H
43
0.94%
SGD
40
0.87%
RAS
40
0.87%
TPS
40
0.87%
PAL
39
0.85%
SMT1/SMT2/SMT3
39
0.85%
ANR
38
0.83%
GES
36
0.78%
IO
33
0.72%
PYKS
33
0.72%
CCR
30
0.65%
SLS
29
0.63%
PMT
28
0.61%
CPD/CYP90A1
28
0.61%
16OMT
27
0.59%
COR
27
0.59%
CSE
27
0.59%
GS
26
0.57%
TAT
26
0.57%
F3'5'H/CYP75A
25
0.54%
FNS
24
0.52%
CYP719
21
0.46%
8HGO
19
0.41%
HMGR
19
0.41%
CYP71
19
0.41%
CYP90D1
18
0.39%
7DLH
17
0.37%
DFR
17
0.37%
CHS
17
0.37%
BR6OX1/CYP85A1
17
0.37%
LAMT
16
0.35%
ANS/LDOX
16
0.35%
NCS
15
0.33%
ISY
13
0.28%
F5H/CYP84A
12
0.26%
ROT3/CYP90C1
12
0.26%
CYP51G1
11
0.24%
BBE
10
0.22%
CCoAOMT
10
0.22%
SQS/FDFT1
10
0.22%
FPPS
10
0.22%
GGPPS
10
0.22%
AACT
10
0.22%
6OMT_4OMT_SOMT
9
0.2%
MPO
8
0.17%
CNMT
8
0.17%
CPR
8
0.17%
CYP80B1
7
0.15%
SQE
7
0.15%
HMGS
7
0.15%
TDC
6
0.13%
HPPR
6
0.13%
MVD
6
0.13%
ADC
5
0.11%
ODC
5
0.11%
TYDC_DDC
5
0.11%
HDR/IspH
5
0.11%
PMK
5
0.11%
MVK
4
0.09%
DXS
4
0.09%
CHI
3
0.07%
SMO1/SMO2
3
0.07%
XMT_MXMT_DXMT
2
0.04%
DWF1
2
0.04%
CPI1
2
0.04%
DET2
2
0.04%
FK
2
0.04%
CMK/IspE
2
0.04%
MCT/IspD
2
0.04%
HDS/IspG
2
0.04%
FLS
1
0.02%
DWF7
1
0.02%
DWF5
1
0.02%
HYD1
1
0.02%
IDI
1
0.02%
MDS/IspF
1
0.02%
DXR
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 479 | 19 | BAHD (173) | View species results |
| Alkaloid pathway | 426 | 21 | 7DLGT (98) | View species results |
| Phenylpropanoid pathway | 403 | 10 | POD (161) | View species results |
| Flavonoid pathway | 260 | 10 | UFGT (149) | View species results |
| Rosmarinic acid pathway | 211 | 7 | C4H (109) | View species results |
| Steroid pathway | 94 | 12 | CAS (48) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1906 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 303 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Gbil02G0016810.1 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| Gbil02G0016950.1 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| Gbil02G0016960.1 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| Gbil02G0016970.1 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| Gbil02G0016980.1 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| Gbil02G0016990.1 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| Gbil02G0021110.1 | Terpenoid | BAHD | medium | pass | BAHD__00027__sp_O80437_GPAT6_ARATH |
| Gbil02G0021120.1 | Terpenoid | BAHD | medium | pass | BAHD__00004__sp_A0A0M4FCN7_RAM2_PETHY |
| Gbil02G0022130.1 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| Gbil03G0005720.1 | Terpenoid | BAHD | low | borderline | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| Gbil03G0007380.1 | Terpenoid | BAHD | medium | pass | BAHD__00062__sp_Q93V61_LCAT3_ARATH |
| Gbil03G0007390.1 | Terpenoid | BAHD | medium | pass | BAHD__00062__sp_Q93V61_LCAT3_ARATH |
| Gbil03G0008400.1 | Terpenoid | BAHD | medium | pass | BAHD__00022__sp_K7PEY4_RAM2_MEDTR |
| Gbil03G0013630.1 | Terpenoid | BAHD | medium | pass | BAHD__00084__sp_Q9M115_ZDH16_ARATH |
| Gbil03G0014540.1 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| Gbil03G0014550.1 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| Gbil03G0014560.1 | Terpenoid | BAHD | low | borderline | BAHD__00087__sp_Q9M3B1_WSD6_ARATH |
| Gbil03G0018830.1 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| Gbil03G0019530.1 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| Gbil03G0021570.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Gbil03G0022640.1 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Gbil03G0024550.1 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| Gbil04G0000460.1 | Terpenoid | BAHD | medium | pass | BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH |
| Gbil04G0000480.1 | Terpenoid | BAHD | medium | pass | BAHD__00093__sp_Q9SV07_ASAT1_ARATH |
| Gbil04G0000940.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Gbil04G0001480.1 | Terpenoid | BAHD | low | borderline | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Gbil04G0001490.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Gbil04G0001500.1 | Terpenoid | BAHD | low | borderline | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| Gbil04G0001510.1 | Terpenoid | BAHD | low | borderline | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| Gbil04G0005230.1 | Terpenoid | BAHD | medium | pass | BAHD__00002__sp_A0A068BIF1_AT9_ACTER |
| Gbil04G0006790.1 | Terpenoid | BAHD | medium | pass | BAHD__00068__sp_Q9C533_ZDHC1_ARATH |
| Gbil04G0006900.1 | Terpenoid | BAHD | medium | pass | BAHD__00057__sp_Q8L7R3_LPCT1_ARATH |
| Gbil04G0007050.1 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| Gbil04G0010760.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Gbil04G0013940.1 | Terpenoid | BAHD | medium | pass | BAHD__00022__sp_K7PEY4_RAM2_MEDTR |
| Gbil04G0015140.1 | Terpenoid | BAHD | medium | pass | BAHD__00060__sp_Q8VYP5_ZDH14_ARATH |
| Gbil04G0017150.1 | Terpenoid | BAHD | medium | pass | BAHD__00022__sp_K7PEY4_RAM2_MEDTR |
| Gbil04G0021400.1 | Terpenoid | BAHD | medium | pass | BAHD__00082__sp_Q9LLY4_LPAT1_BRANA |
| Gbil05G0000830.1 | Terpenoid | BAHD | low | borderline | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| Gbil05G0000990.1 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| Gbil05G0001300.1 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| Gbil05G0002220.1 | Terpenoid | BAHD | medium | pass | BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH |
| Gbil05G0002970.1 | Terpenoid | BAHD | low | borderline | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| Gbil05G0003450.1 | Terpenoid | BAHD | low | borderline | BAHD__00024__sp_O23393_BIA1_ARATH |
| Gbil05G0004210.1 | Terpenoid | BAHD | medium | pass | BAHD__00043__sp_Q52T38_ZDH22_ARATH |
| Gbil05G0004220.1 | Terpenoid | BAHD | low | borderline | BAHD__00043__sp_Q52T38_ZDH22_ARATH |
| Gbil05G0006240.1 | Terpenoid | BAHD | medium | pass | BAHD__00022__sp_K7PEY4_RAM2_MEDTR |
| Gbil05G0007200.1 | Terpenoid | BAHD | medium | pass | BAHD__00012__sp_A1XWY7_CFAT_PETHY |
| Gbil05G0007210.1 | Terpenoid | BAHD | medium | pass | BAHD__00012__sp_A1XWY7_CFAT_PETHY |
| Gbil05G0007260.1 | Terpenoid | BAHD | low | borderline | BAHD__00073__sp_Q9FF86_DCR_ARATH |