PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

2037
Candidate Protein Records
1873
Pathway-Level Records
4596
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Gbil12G0004420.1 Alkaloid T3O low borderline
Gbil12G0004430.1 Alkaloid T3O low borderline
Gbil12G0004470.1 Alkaloid T3O low borderline
Gbil12G0004480.1 Alkaloid T3O low borderline
Gbil12G0006560.1 Alkaloid T3O medium pass
Gbil12G0007570.1 Alkaloid T3O low borderline
Gbil12G0007580.1 Alkaloid T3O low borderline
Gbil12G0007590.1 Alkaloid T3O low borderline
Gbil12G0007610.1 Alkaloid T3O low borderline
Gbil12G0007620.1 Alkaloid T3O low borderline
Gbil12G0007640.1 Alkaloid T3O low borderline
Gbil12G0007650.1 Alkaloid T3O low borderline
Gbilctg282870001800.1 Alkaloid T3O medium borderline
Gbilctg320800001830.1 Alkaloid T3O low borderline
Gbil02G0003100.1 Alkaloid TDC low borderline
Gbil03G0013360.1 Alkaloid TDC low borderline
Gbil05G0007330.1 Alkaloid TDC medium borderline
Gbil05G0007450.1 Alkaloid TDC medium borderline
Gbil05G0007480.1 Alkaloid TDC medium borderline
Gbil11G0007660.1 Alkaloid TDC low borderline
Gbil01G0007300.1 Alkaloid TRI/TRII low borderline
Gbil01G0027970.1 Alkaloid TRI/TRII medium pass
Gbil01G0028640.1 Alkaloid TRI/TRII low borderline
Gbil01G0028650.1 Alkaloid TRI/TRII low borderline
Gbil01G0028660.1 Alkaloid TRI/TRII low borderline
Gbil01G0028670.1 Alkaloid TRI/TRII medium pass
Gbil01G0028680.1 Alkaloid TRI/TRII low borderline
Gbil01G0028710.1 Alkaloid TRI/TRII low borderline
Gbil01G0028720.1 Alkaloid TRI/TRII medium pass
Gbil03G0008220.1 Alkaloid TRI/TRII medium pass
Gbil03G0010230.1 Alkaloid TRI/TRII low borderline
Gbil03G0024110.1 Alkaloid TRI/TRII medium pass
Gbil04G0010520.1 Alkaloid TRI/TRII medium pass
Gbil04G0014880.1 Alkaloid TRI/TRII medium pass
Gbil04G0014890.1 Alkaloid TRI/TRII medium pass
Gbil04G0014900.1 Alkaloid TRI/TRII medium pass
Gbil04G0014910.1 Alkaloid TRI/TRII medium pass
Gbil04G0014920.1 Alkaloid TRI/TRII medium pass
Gbil04G0014930.1 Alkaloid TRI/TRII medium pass
Gbil04G0014940.1 Alkaloid TRI/TRII medium pass
Gbil04G0019900.1 Alkaloid TRI/TRII medium pass
Gbil04G0023180.1 Alkaloid TRI/TRII low borderline
Gbil05G0000180.1 Alkaloid TRI/TRII medium pass
Gbil05G0014610.1 Alkaloid TRI/TRII medium pass
Gbil06G0004330.1 Alkaloid TRI/TRII medium pass
Gbil06G0010830.1 Alkaloid TRI/TRII medium pass
Gbil07G0016780.1 Alkaloid TRI/TRII medium pass
Gbil07G0016950.1 Alkaloid TRI/TRII medium pass
Gbil07G0016980.1 Alkaloid TRI/TRII medium pass
Gbil08G0001850.1 Alkaloid TRI/TRII medium pass