PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

2037
Candidate Protein Records
1873
Pathway-Level Records
4596
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Gbil09G0016520.1 Flavonoid ANS/LDOX medium borderline
Gbil11G0015390.1 Flavonoid ANS/LDOX low borderline
Gbil12G0006260.1 Flavonoid ANS/LDOX medium borderline
Gbil12G0006270.1 Flavonoid ANS/LDOX medium borderline
Gbil12G0006280.1 Flavonoid ANS/LDOX medium borderline
Gbil12G0006290.1 Flavonoid ANS/LDOX medium borderline
Gbil12G0006570.1 Flavonoid ANS/LDOX medium borderline
Gbil12G0018180.1 Flavonoid ANS/LDOX medium borderline
Gbilctg374830001990.1 Flavonoid ANS/LDOX medium pass
Gbil01G0015890.1 Flavonoid C4H medium borderline
Gbil01G0022930.1 Flavonoid C4H medium borderline
Gbil03G0005290.1 Flavonoid C4H low borderline
Gbil03G0009410.1 Flavonoid C4H medium borderline
Gbil03G0009420.1 Flavonoid C4H medium borderline
Gbil03G0009590.1 Flavonoid C4H medium borderline
Gbil03G0009600.1 Flavonoid C4H medium pass
Gbil03G0009710.1 Flavonoid C4H medium borderline
Gbil05G0006960.1 Flavonoid C4H medium borderline
Gbil05G0011710.1 Flavonoid C4H medium borderline
Gbil05G0012470.1 Flavonoid C4H medium borderline
Gbil08G0017510.1 Flavonoid C4H medium borderline
Gbil08G0017640.1 Flavonoid C4H medium borderline
Gbil08G0017650.1 Flavonoid C4H medium borderline
Gbil08G0017660.1 Flavonoid C4H medium pass
Gbil08G0017670.1 Flavonoid C4H medium borderline
Gbil08G0018730.1 Flavonoid C4H medium borderline
Gbil01G0028750.1 Flavonoid CHI medium pass
Gbil04G0019660.1 Flavonoid CHI medium pass
Gbil08G0001510.1 Flavonoid CHI medium pass
Gbil03G0003540.1 Flavonoid CHS medium pass
Gbil04G0002880.1 Flavonoid CHS medium pass
Gbil06G0001550.1 Flavonoid CHS medium pass
Gbil06G0001640.1 Flavonoid CHS medium pass
Gbil06G0014240.1 Flavonoid CHS medium pass
Gbil06G0014250.1 Flavonoid CHS medium pass
Gbil06G0014260.1 Flavonoid CHS medium pass
Gbil06G0014270.1 Flavonoid CHS medium pass
Gbil06G0014280.1 Flavonoid CHS low borderline
Gbil06G0014460.1 Flavonoid CHS medium pass
Gbil06G0014470.1 Flavonoid CHS medium pass
Gbil07G0017410.1 Flavonoid CHS medium pass
Gbil09G0018700.1 Flavonoid CHS medium pass
Gbil10G0012050.1 Flavonoid CHS medium pass
Gbil10G0012140.1 Flavonoid CHS medium pass
Gbil10G0012150.1 Flavonoid CHS medium pass
Gbil12G0001250.1 Flavonoid CHS medium pass
Gbil01G0001720.1 Flavonoid DFR medium borderline
Gbil01G0026350.1 Flavonoid DFR medium borderline
Gbil01G0026360.1 Flavonoid DFR high pass
Gbil01G0026370.1 Flavonoid DFR medium borderline