PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

1873
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Gene Pathway Family Confidence Status
Gbil06G0000060.1 Alkaloid 7DLGT medium pass
Gbil06G0007310.1 Alkaloid 7DLGT low borderline
Gbil06G0011670.1 Alkaloid 7DLGT medium pass
Gbil06G0011680.1 Alkaloid 7DLGT medium pass
Gbil06G0011690.1 Alkaloid 7DLGT medium pass
Gbil06G0011720.1 Alkaloid 7DLGT medium pass
Gbil06G0014310.1 Alkaloid 7DLGT low borderline
Gbil06G0014320.1 Alkaloid 7DLGT low borderline
Gbil06G0014330.1 Alkaloid 7DLGT low borderline
Gbil06G0014340.1 Alkaloid 7DLGT low borderline
Gbil06G0014350.1 Alkaloid 7DLGT low borderline
Gbil06G0014360.1 Alkaloid 7DLGT low borderline
Gbil06G0014370.1 Alkaloid 7DLGT low borderline
Gbil06G0014380.1 Alkaloid 7DLGT low borderline
Gbil06G0014390.1 Alkaloid 7DLGT medium pass
Gbil06G0014400.1 Alkaloid 7DLGT medium pass
Gbil06G0014410.1 Alkaloid 7DLGT low borderline
Gbil06G0014420.1 Alkaloid 7DLGT low borderline
Gbil06G0018820.1 Alkaloid 7DLGT medium pass
Gbil06G0018830.1 Alkaloid 7DLGT high pass
Gbil06G0018840.1 Alkaloid 7DLGT low borderline
Gbil06G0018850.1 Alkaloid 7DLGT low borderline
Gbil06G0018860.1 Alkaloid 7DLGT low borderline
Gbil07G0000840.1 Alkaloid 7DLGT low borderline
Gbil07G0006160.1 Alkaloid 7DLGT low borderline
Gbil07G0017860.1 Alkaloid 7DLGT low borderline
Gbil08G0004060.1 Alkaloid 7DLGT low borderline
Gbil08G0004820.1 Alkaloid 7DLGT low borderline
Gbil08G0004830.1 Alkaloid 7DLGT low borderline
Gbil08G0016420.1 Alkaloid 7DLGT low borderline
Gbil08G0020220.1 Alkaloid 7DLGT low borderline
Gbil08G0021740.1 Alkaloid 7DLGT low borderline
Gbil09G0009760.1 Alkaloid 7DLGT medium pass
Gbil09G0011580.1 Alkaloid 7DLGT low borderline
Gbil09G0011590.1 Alkaloid 7DLGT low borderline
Gbil09G0016710.1 Alkaloid 7DLGT low borderline
Gbil09G0016730.1 Alkaloid 7DLGT medium pass
Gbil09G0016740.1 Alkaloid 7DLGT low borderline
Gbil09G0016770.1 Alkaloid 7DLGT low borderline
Gbil10G0001250.1 Alkaloid 7DLGT low borderline
Gbil10G0003070.1 Alkaloid 7DLGT medium pass
Gbil10G0003210.1 Alkaloid 7DLGT medium pass
Gbil10G0003220.1 Alkaloid 7DLGT medium pass
Gbil10G0003230.1 Alkaloid 7DLGT medium pass
Gbil10G0003270.1 Alkaloid 7DLGT medium pass
Gbil10G0003280.1 Alkaloid 7DLGT high pass
Gbil10G0004530.1 Alkaloid 7DLGT high pass
Gbil10G0004540.1 Alkaloid 7DLGT high pass
Gbil10G0009600.1 Alkaloid 7DLGT low borderline
Gbil10G0010000.1 Alkaloid 7DLGT medium pass