PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

2037
Candidate Protein Records
1873
Pathway-Level Records
4596
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Gbil12G0008760.1 Flavonoid UFGT medium pass
Gbil12G0008840.1 Flavonoid UFGT medium pass
Gbil12G0008870.1 Flavonoid UFGT medium pass
Gbil12G0008880.1 Flavonoid UFGT medium pass
Gbil12G0008900.1 Flavonoid UFGT low borderline
Gbil12G0008910.1 Flavonoid UFGT medium pass
Gbil12G0008940.1 Flavonoid UFGT medium pass
Gbil12G0008950.1 Flavonoid UFGT high pass
Gbil12G0008960.1 Flavonoid UFGT medium pass
Gbil12G0010320.1 Flavonoid UFGT medium pass
Gbil12G0018250.1 Flavonoid UFGT medium pass
Gbilctg1979930001180.1 Flavonoid UFGT high pass
Gbil01G0006910.1 Phenylpropanoid 4CL medium pass
Gbil01G0006920.1 Phenylpropanoid 4CL medium pass
Gbil01G0006930.1 Phenylpropanoid 4CL medium pass
Gbil01G0006940.1 Phenylpropanoid 4CL medium pass
Gbil01G0008510.1 Phenylpropanoid 4CL medium pass
Gbil01G0010760.1 Phenylpropanoid 4CL medium pass
Gbil01G0019100.1 Phenylpropanoid 4CL medium pass
Gbil01G0019240.1 Phenylpropanoid 4CL medium pass
Gbil01G0019540.1 Phenylpropanoid 4CL medium pass
Gbil01G0019550.1 Phenylpropanoid 4CL medium pass
Gbil01G0020040.1 Phenylpropanoid 4CL medium pass
Gbil01G0028600.1 Phenylpropanoid 4CL low borderline
Gbil02G0005880.1 Phenylpropanoid 4CL low borderline
Gbil02G0006650.1 Phenylpropanoid 4CL medium pass
Gbil02G0006660.1 Phenylpropanoid 4CL medium pass
Gbil02G0008360.1 Phenylpropanoid 4CL medium pass
Gbil02G0008780.1 Phenylpropanoid 4CL medium pass
Gbil02G0013400.1 Phenylpropanoid 4CL medium pass
Gbil03G0000320.1 Phenylpropanoid 4CL low borderline
Gbil03G0014910.1 Phenylpropanoid 4CL medium pass
Gbil03G0014920.1 Phenylpropanoid 4CL medium pass
Gbil03G0014930.1 Phenylpropanoid 4CL medium pass
Gbil03G0014940.1 Phenylpropanoid 4CL medium pass
Gbil03G0014970.1 Phenylpropanoid 4CL low borderline
Gbil03G0020530.1 Phenylpropanoid 4CL low borderline
Gbil04G0000780.1 Phenylpropanoid 4CL low borderline
Gbil04G0012510.1 Phenylpropanoid 4CL medium pass
Gbil04G0017000.1 Phenylpropanoid 4CL medium pass
Gbil06G0002990.1 Phenylpropanoid 4CL medium pass
Gbil06G0003000.1 Phenylpropanoid 4CL medium pass
Gbil06G0004180.1 Phenylpropanoid 4CL medium pass
Gbil06G0004190.1 Phenylpropanoid 4CL medium pass
Gbil06G0004200.1 Phenylpropanoid 4CL medium pass
Gbil06G0006040.1 Phenylpropanoid 4CL low borderline
Gbil06G0006060.1 Phenylpropanoid 4CL low borderline
Gbil07G0018380.1 Phenylpropanoid 4CL low borderline
Gbil08G0001770.1 Phenylpropanoid 4CL low borderline
Gbil08G0001790.1 Phenylpropanoid 4CL low borderline