PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

2037
Candidate Protein Records
1873
Pathway-Level Records
4596
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Gbil03G0009600.1 Phenylpropanoid C4H/CYP73A medium borderline
Gbil03G0022520.1 Phenylpropanoid C4H/CYP73A medium borderline
Gbil03G0022530.1 Phenylpropanoid C4H/CYP73A medium borderline
Gbil03G0022540.1 Phenylpropanoid C4H/CYP73A medium borderline
Gbil03G0022830.1 Phenylpropanoid C4H/CYP73A medium borderline
Gbil05G0006370.1 Phenylpropanoid C4H/CYP73A low borderline
Gbil06G0002090.1 Phenylpropanoid C4H/CYP73A low borderline
Gbil06G0007340.1 Phenylpropanoid C4H/CYP73A medium borderline
Gbil08G0017660.1 Phenylpropanoid C4H/CYP73A medium borderline
Gbil01G0020060.1 Phenylpropanoid CAD medium pass
Gbil01G0020130.1 Phenylpropanoid CAD medium pass
Gbil01G0026760.1 Phenylpropanoid CAD low borderline
Gbil02G0002890.1 Phenylpropanoid CAD low borderline
Gbil03G0003210.1 Phenylpropanoid CAD medium borderline
Gbil03G0003250.1 Phenylpropanoid CAD medium borderline
Gbil03G0007130.1 Phenylpropanoid CAD medium pass
Gbil03G0014330.1 Phenylpropanoid CAD medium borderline
Gbil03G0014340.1 Phenylpropanoid CAD medium borderline
Gbil03G0017240.1 Phenylpropanoid CAD medium pass
Gbil03G0017330.1 Phenylpropanoid CAD medium pass
Gbil03G0017740.1 Phenylpropanoid CAD medium borderline
Gbil03G0017750.1 Phenylpropanoid CAD medium borderline
Gbil03G0017980.1 Phenylpropanoid CAD medium pass
Gbil03G0018010.1 Phenylpropanoid CAD low borderline
Gbil03G0020740.1 Phenylpropanoid CAD medium pass
Gbil03G0021500.1 Phenylpropanoid CAD medium borderline
Gbil03G0021510.1 Phenylpropanoid CAD medium borderline
Gbil03G0021520.1 Phenylpropanoid CAD medium borderline
Gbil03G0021530.1 Phenylpropanoid CAD medium borderline
Gbil03G0021540.1 Phenylpropanoid CAD medium borderline
Gbil04G0005380.1 Phenylpropanoid CAD medium pass
Gbil04G0006710.1 Phenylpropanoid CAD low borderline
Gbil04G0006720.1 Phenylpropanoid CAD low borderline
Gbil04G0006730.1 Phenylpropanoid CAD low borderline
Gbil04G0006740.1 Phenylpropanoid CAD low borderline
Gbil04G0009970.1 Phenylpropanoid CAD medium pass
Gbil04G0016020.1 Phenylpropanoid CAD medium pass
Gbil04G0021770.1 Phenylpropanoid CAD medium pass
Gbil04G0021780.1 Phenylpropanoid CAD medium pass
Gbil04G0021790.1 Phenylpropanoid CAD medium pass
Gbil04G0022070.1 Phenylpropanoid CAD low borderline
Gbil05G0007190.1 Phenylpropanoid CAD medium pass
Gbil05G0007670.1 Phenylpropanoid CAD low borderline
Gbil05G0007860.1 Phenylpropanoid CAD medium pass
Gbil05G0007900.1 Phenylpropanoid CAD medium pass
Gbil05G0007950.1 Phenylpropanoid CAD medium pass
Gbil05G0012460.1 Phenylpropanoid CAD low borderline
Gbil06G0002200.1 Phenylpropanoid CAD low borderline
Gbil06G0009290.1 Phenylpropanoid CAD medium pass
Gbil06G0010280.1 Phenylpropanoid CAD medium pass