PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

1873
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Gbil10G0004760.1 Steroid DWF4/CYP90B1 medium borderline
Gbil10G0004770.1 Steroid DWF4/CYP90B1 medium borderline
Gbil10G0006210.1 Steroid DWF4/CYP90B1 medium borderline
Gbil10G0006860.1 Steroid DWF4/CYP90B1 medium borderline
Gbil10G0020270.1 Steroid DWF4/CYP90B1 low borderline
Gbil11G0000150.1 Steroid DWF4/CYP90B1 low borderline
Gbil11G0000160.1 Steroid DWF4/CYP90B1 low borderline
Gbil11G0000170.1 Steroid DWF4/CYP90B1 low borderline
Gbil11G0001710.1 Steroid DWF4/CYP90B1 medium pass
Gbil11G0001920.1 Steroid DWF4/CYP90B1 low borderline
Gbil11G0001930.1 Steroid DWF4/CYP90B1 low borderline
Gbil11G0001940.1 Steroid DWF4/CYP90B1 low borderline
Gbil11G0002130.1 Steroid DWF4/CYP90B1 medium borderline
Gbil11G0002140.1 Steroid DWF4/CYP90B1 medium borderline
Gbil11G0002200.1 Steroid DWF4/CYP90B1 medium borderline
Gbil11G0005360.1 Steroid DWF4/CYP90B1 low borderline
Gbil11G0005370.1 Steroid DWF4/CYP90B1 low borderline
Gbil12G0001530.1 Steroid DWF4/CYP90B1 low borderline
Gbil12G0004430.1 Steroid DWF4/CYP90B1 low borderline
Gbil12G0004470.1 Steroid DWF4/CYP90B1 low borderline
Gbil12G0005060.1 Steroid DWF4/CYP90B1 low borderline
Gbil12G0007580.1 Steroid DWF4/CYP90B1 low borderline
Gbil12G0007610.1 Steroid DWF4/CYP90B1 low borderline
Gbil12G0007640.1 Steroid DWF4/CYP90B1 low borderline
Gbil12G0007650.1 Steroid DWF4/CYP90B1 low borderline
Gbil12G0016690.1 Steroid DWF4/CYP90B1 low borderline
Gbil12G0018550.1 Steroid DWF4/CYP90B1 low borderline
Gbil12G0018560.1 Steroid DWF4/CYP90B1 low borderline
Gbil12G0018570.1 Steroid DWF4/CYP90B1 low borderline
Gbil12G0018620.1 Steroid DWF4/CYP90B1 low borderline
Gbil12G0018630.1 Steroid DWF4/CYP90B1 low borderline
Gbilctg1592190000940.1 Steroid DWF4/CYP90B1 low borderline
Gbil08G0005600.1 Steroid DWF5 medium borderline
Gbil02G0020080.1 Steroid DWF7 low borderline
Gbil05G0007170.1 Steroid FK high pass
Gbilctg1193970000380.1 Steroid FK low borderline
Gbil09G0012470.1 Steroid HYD1 high pass
Gbil01G0006810.1 Steroid ROT3/CYP90C1 medium borderline
Gbil01G0013840.1 Steroid ROT3/CYP90C1 medium borderline
Gbil01G0014670.1 Steroid ROT3/CYP90C1 medium borderline
Gbil01G0030040.1 Steroid ROT3/CYP90C1 medium borderline
Gbil03G0001140.1 Steroid ROT3/CYP90C1 low borderline
Gbil05G0006400.1 Steroid ROT3/CYP90C1 medium borderline
Gbil05G0006410.1 Steroid ROT3/CYP90C1 medium borderline
Gbil07G0016430.1 Steroid ROT3/CYP90C1 medium borderline
Gbil08G0011680.1 Steroid ROT3/CYP90C1 medium borderline
Gbil10G0000960.1 Steroid ROT3/CYP90C1 medium borderline
Gbil12G0006560.1 Steroid ROT3/CYP90C1 medium borderline
Gbil12G0006590.1 Steroid ROT3/CYP90C1 medium pass
Gbil01G0028860.1 Steroid SMO1/SMO2 medium pass