PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

2037
Candidate Protein Records
1873
Pathway-Level Records
4596
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Gbil02G0013620.1 Rosmarinic Acid RAS medium pass
Gbil02G0013640.1 Rosmarinic Acid RAS low borderline
Gbil02G0016770.1 Rosmarinic Acid RAS medium pass
Gbil02G0016780.1 Rosmarinic Acid RAS medium pass
Gbil02G0016790.1 Rosmarinic Acid RAS medium pass
Gbil02G0016800.1 Rosmarinic Acid RAS low borderline
Gbil02G0016810.1 Rosmarinic Acid RAS low borderline
Gbil02G0016950.1 Rosmarinic Acid RAS low borderline
Gbil02G0016960.1 Rosmarinic Acid RAS medium pass
Gbil02G0016970.1 Rosmarinic Acid RAS medium pass
Gbil04G0001970.1 Rosmarinic Acid RAS low borderline
Gbil04G0005230.1 Rosmarinic Acid RAS medium pass
Gbil04G0005260.1 Rosmarinic Acid RAS low borderline
Gbil05G0011700.1 Rosmarinic Acid RAS medium pass
Gbil05G0013850.1 Rosmarinic Acid RAS medium pass
Gbil06G0007090.1 Rosmarinic Acid RAS low borderline
Gbil06G0007100.1 Rosmarinic Acid RAS low borderline
Gbil07G0003750.1 Rosmarinic Acid RAS medium pass
Gbil07G0003990.1 Rosmarinic Acid RAS medium pass
Gbil07G0004000.1 Rosmarinic Acid RAS low borderline
Gbil09G0016400.1 Rosmarinic Acid RAS medium pass
Gbil10G0002970.1 Rosmarinic Acid RAS medium pass
Gbil10G0011640.1 Rosmarinic Acid RAS medium pass
Gbil10G0011650.1 Rosmarinic Acid RAS medium pass
Gbil10G0011780.1 Rosmarinic Acid RAS low borderline
Gbil11G0004040.1 Rosmarinic Acid RAS medium pass
Gbil11G0013310.1 Rosmarinic Acid RAS medium pass
Gbil11G0017530.1 Rosmarinic Acid RAS low borderline
Gbil12G0011880.1 Rosmarinic Acid RAS medium pass
Gbilctg866230003300.1 Rosmarinic Acid RAS low borderline
Gbilctg866240003310.1 Rosmarinic Acid RAS low borderline
Gbil01G0018330.1 Rosmarinic Acid TAT medium pass
Gbil01G0020190.1 Rosmarinic Acid TAT medium pass
Gbil01G0020200.1 Rosmarinic Acid TAT medium pass
Gbil01G0029710.1 Rosmarinic Acid TAT low borderline
Gbil01G0030470.1 Rosmarinic Acid TAT low borderline
Gbil04G0000940.1 Rosmarinic Acid TAT low borderline
Gbil04G0001480.1 Rosmarinic Acid TAT low borderline
Gbil04G0001490.1 Rosmarinic Acid TAT low borderline
Gbil04G0001500.1 Rosmarinic Acid TAT low borderline
Gbil04G0001510.1 Rosmarinic Acid TAT low borderline
Gbil04G0010930.1 Rosmarinic Acid TAT medium pass
Gbil04G0010940.1 Rosmarinic Acid TAT medium pass
Gbil05G0017980.1 Rosmarinic Acid TAT low borderline
Gbil08G0005680.1 Rosmarinic Acid TAT medium pass
Gbil08G0005690.1 Rosmarinic Acid TAT medium pass
Gbil08G0005710.1 Rosmarinic Acid TAT medium pass
Gbil08G0012680.1 Rosmarinic Acid TAT low borderline
Gbil08G0013070.1 Rosmarinic Acid TAT low borderline
Gbil08G0013080.1 Rosmarinic Acid TAT low borderline