PlantSME Plant secondary metabolism enzyme database

Gossypium raimondii (gossypium_raimondii)

Imported from atlas release summary for Gossypium raimondii.

3434
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 968 21 BAHD (459) View species results
Phenylpropanoid pathway 784 11 POD (333) View species results
Alkaloid pathway 770 23 NMT (140) View species results
Flavonoid pathway 341 12 UFGT (176) View species results
Steroid pathway 315 13 CAS (138) View species results
Rosmarinic acid pathway 256 7 C4H (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2559 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ROT3/CYP90C1
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Gene Pathway Family Confidence Status
Grai01G0005860.1 Steroid ROT3/CYP90C1 medium borderline
Grai01G0009030.2 Steroid ROT3/CYP90C1 medium borderline
Grai01G0009030.3 Steroid ROT3/CYP90C1 medium borderline
Grai02G0006240.2 Steroid ROT3/CYP90C1 medium borderline
Grai03G0001210.1 Steroid ROT3/CYP90C1 medium borderline
Grai03G0001210.2 Steroid ROT3/CYP90C1 medium borderline
Grai03G0001210.3 Steroid ROT3/CYP90C1 medium borderline
Grai03G0001210.4 Steroid ROT3/CYP90C1 medium borderline
Grai03G0001210.5 Steroid ROT3/CYP90C1 medium borderline
Grai03G0001210.6 Steroid ROT3/CYP90C1 medium borderline
Grai03G0012550.1 Steroid ROT3/CYP90C1 medium borderline
Grai03G0012550.2 Steroid ROT3/CYP90C1 medium borderline
Grai03G0012550.3 Steroid ROT3/CYP90C1 medium borderline
Grai03G0012550.6 Steroid ROT3/CYP90C1 medium borderline
Grai03G0012550.7 Steroid ROT3/CYP90C1 medium borderline
Grai03G0012550.8 Steroid ROT3/CYP90C1 medium borderline
Grai03G0016220.1 Steroid ROT3/CYP90C1 medium borderline
Grai03G0016230.1 Steroid ROT3/CYP90C1 medium borderline
Grai03G0016230.2 Steroid ROT3/CYP90C1 medium borderline
Grai04G0018720.1 Steroid ROT3/CYP90C1 medium borderline
Grai04G0018730.1 Steroid ROT3/CYP90C1 medium borderline
Grai04G0018730.2 Steroid ROT3/CYP90C1 medium borderline
Grai04G0018730.3 Steroid ROT3/CYP90C1 medium borderline
Grai04G0018730.4 Steroid ROT3/CYP90C1 medium borderline
Grai05G0017610.1 Steroid ROT3/CYP90C1 medium borderline
Grai06G0021610.1 Steroid ROT3/CYP90C1 low borderline
Grai06G0021620.1 Steroid ROT3/CYP90C1 medium borderline
Grai07G0019910.1 Steroid ROT3/CYP90C1 medium borderline
Grai08G0024410.1 Steroid ROT3/CYP90C1 medium borderline
Grai09G0014060.1 Steroid ROT3/CYP90C1 medium borderline
Grai09G0014060.2 Steroid ROT3/CYP90C1 medium borderline
Grai09G0023800.1 Steroid ROT3/CYP90C1 low borderline
Grai09G0042470.1 Steroid ROT3/CYP90C1 medium borderline
Grai09G0043480.1 Steroid ROT3/CYP90C1 medium borderline
Grai10G0004190.1 Steroid ROT3/CYP90C1 low borderline
Grai10G0019090.1 Steroid ROT3/CYP90C1 medium borderline
Grai10G0019090.2 Steroid ROT3/CYP90C1 medium borderline
Grai11G0000610.1 Steroid ROT3/CYP90C1 low borderline
Grai11G0015800.1 Steroid ROT3/CYP90C1 medium borderline
Grai13G0007140.1 Steroid ROT3/CYP90C1 medium borderline
Graiscaffold_1220000200.1 Steroid ROT3/CYP90C1 medium borderline
Graiscaffold_190001280.1 Steroid ROT3/CYP90C1 medium borderline
Graiscaffold_5120002280.1 Steroid ROT3/CYP90C1 low borderline
Graiscaffold_5120002280.2 Steroid ROT3/CYP90C1 low borderline