PlantSME Plant secondary metabolism enzyme database

Gossypium raimondii (gossypium_raimondii)

Imported from atlas release summary for Gossypium raimondii.

4361
Candidate Protein Records
3434
Pathway-Level Records
8102
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 968 21 BAHD (459) View species results
Phenylpropanoid pathway 784 11 POD (333) View species results
Alkaloid pathway 770 23 NMT (140) View species results
Flavonoid pathway 341 12 UFGT (176) View species results
Steroid pathway 315 13 CAS (138) View species results
Rosmarinic acid pathway 256 7 C4H (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2559 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Grai02G0004550.1 Alkaloid CODM/T6ODM medium borderline
Grai02G0004570.1 Alkaloid CODM/T6ODM medium borderline
Grai02G0006670.1 Alkaloid CODM/T6ODM medium borderline
Grai02G0006670.2 Alkaloid CODM/T6ODM medium borderline
Grai02G0006670.3 Alkaloid CODM/T6ODM medium borderline
Grai02G0006670.4 Alkaloid CODM/T6ODM medium borderline
Grai02G0006670.5 Alkaloid CODM/T6ODM medium borderline
Grai02G0006670.6 Alkaloid CODM/T6ODM medium borderline
Grai02G0006670.7 Alkaloid CODM/T6ODM medium borderline
Grai02G0008280.1 Alkaloid CODM/T6ODM medium borderline
Grai02G0015600.1 Alkaloid CODM/T6ODM medium borderline
Grai02G0015610.1 Alkaloid CODM/T6ODM medium borderline
Grai02G0015620.2 Alkaloid CODM/T6ODM medium borderline
Grai02G0026310.1 Alkaloid CODM/T6ODM medium borderline
Grai03G0009010.1 Alkaloid CODM/T6ODM medium borderline
Grai03G0009010.2 Alkaloid CODM/T6ODM medium borderline
Grai03G0009020.1 Alkaloid CODM/T6ODM medium borderline
Grai03G0009040.1 Alkaloid CODM/T6ODM medium borderline
Grai04G0006210.2 Alkaloid CODM/T6ODM medium borderline
Grai04G0006210.3 Alkaloid CODM/T6ODM medium borderline
Grai04G0006210.4 Alkaloid CODM/T6ODM medium borderline
Grai04G0012830.1 Alkaloid CODM/T6ODM medium borderline
Grai04G0012830.2 Alkaloid CODM/T6ODM medium borderline
Grai04G0012830.3 Alkaloid CODM/T6ODM medium borderline
Grai04G0012830.4 Alkaloid CODM/T6ODM medium borderline
Grai04G0019610.1 Alkaloid CODM/T6ODM medium borderline
Grai04G0019610.2 Alkaloid CODM/T6ODM medium borderline
Grai04G0019610.4 Alkaloid CODM/T6ODM medium borderline
Grai04G0019610.5 Alkaloid CODM/T6ODM medium borderline
Grai04G0019610.6 Alkaloid CODM/T6ODM medium borderline
Grai04G0020590.1 Alkaloid CODM/T6ODM medium borderline
Grai04G0020590.2 Alkaloid CODM/T6ODM medium borderline
Grai04G0020590.3 Alkaloid CODM/T6ODM medium borderline
Grai04G0025850.1 Alkaloid CODM/T6ODM medium borderline
Grai04G0025860.1 Alkaloid CODM/T6ODM medium borderline
Grai04G0025870.1 Alkaloid CODM/T6ODM medium borderline
Grai05G0004860.1 Alkaloid CODM/T6ODM medium borderline
Grai05G0004880.1 Alkaloid CODM/T6ODM medium borderline
Grai05G0005450.1 Alkaloid CODM/T6ODM medium borderline
Grai05G0015170.1 Alkaloid CODM/T6ODM medium borderline
Grai05G0015550.1 Alkaloid CODM/T6ODM medium borderline
Grai05G0015550.2 Alkaloid CODM/T6ODM medium borderline
Grai06G0005140.1 Alkaloid CODM/T6ODM medium borderline
Grai06G0005140.2 Alkaloid CODM/T6ODM medium borderline
Grai06G0007090.1 Alkaloid CODM/T6ODM medium borderline
Grai06G0007120.1 Alkaloid CODM/T6ODM medium borderline
Grai06G0007150.1 Alkaloid CODM/T6ODM medium borderline
Grai06G0007160.1 Alkaloid CODM/T6ODM medium borderline
Grai06G0007170.1 Alkaloid CODM/T6ODM medium borderline
Grai06G0007180.1 Alkaloid CODM/T6ODM low borderline