PlantSME Plant secondary metabolism enzyme database

Gossypium raimondii (gossypium_raimondii)

Imported from atlas release summary for Gossypium raimondii.

4361
Candidate Protein Records
3434
Pathway-Level Records
8102
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 968 21 BAHD (459) View species results
Phenylpropanoid pathway 784 11 POD (333) View species results
Alkaloid pathway 770 23 NMT (140) View species results
Flavonoid pathway 341 12 UFGT (176) View species results
Steroid pathway 315 13 CAS (138) View species results
Rosmarinic acid pathway 256 7 C4H (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2559 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Grai12G0001260.2 Rosmarinic Acid C4H low borderline
Grai12G0001260.3 Rosmarinic Acid C4H low borderline
Grai12G0001260.6 Rosmarinic Acid C4H low borderline
Grai12G0002380.1 Rosmarinic Acid C4H low borderline
Grai12G0006590.1 Rosmarinic Acid C4H low borderline
Grai12G0016430.1 Rosmarinic Acid C4H low borderline
Grai12G0016440.1 Rosmarinic Acid C4H medium pass
Grai12G0016450.1 Rosmarinic Acid C4H low borderline
Grai12G0016510.1 Rosmarinic Acid C4H low borderline
Grai12G0017560.1 Rosmarinic Acid C4H low borderline
Grai12G0018530.1 Rosmarinic Acid C4H low borderline
Grai13G0000090.1 Rosmarinic Acid C4H medium pass
Grai13G0000090.2 Rosmarinic Acid C4H medium pass
Grai13G0001370.1 Rosmarinic Acid C4H low borderline
Grai13G0002530.1 Rosmarinic Acid C4H low borderline
Grai13G0002540.1 Rosmarinic Acid C4H medium pass
Grai13G0003280.1 Rosmarinic Acid C4H medium pass
Grai13G0004130.1 Rosmarinic Acid C4H low borderline
Grai13G0004190.1 Rosmarinic Acid C4H low borderline
Grai13G0007140.1 Rosmarinic Acid C4H low borderline
Grai13G0008880.1 Rosmarinic Acid C4H low borderline
Grai13G0009500.1 Rosmarinic Acid C4H medium pass
Grai13G0009700.1 Rosmarinic Acid C4H low borderline
Grai13G0010110.1 Rosmarinic Acid C4H low borderline
Grai13G0010340.1 Rosmarinic Acid C4H low borderline
Grai13G0010350.1 Rosmarinic Acid C4H low borderline
Grai13G0014150.1 Rosmarinic Acid C4H low borderline
Grai13G0015320.1 Rosmarinic Acid C4H medium pass
Grai13G0015430.1 Rosmarinic Acid C4H low borderline
Grai13G0015430.2 Rosmarinic Acid C4H low borderline
Grai13G0018020.1 Rosmarinic Acid C4H low borderline
Grai13G0018020.2 Rosmarinic Acid C4H low borderline
Grai13G0018020.3 Rosmarinic Acid C4H low borderline
Grai13G0018020.4 Rosmarinic Acid C4H low borderline
Grai13G0018080.1 Rosmarinic Acid C4H low borderline
Grai13G0018090.1 Rosmarinic Acid C4H low borderline
Grai13G0018170.1 Rosmarinic Acid C4H medium pass
Grai13G0023330.1 Rosmarinic Acid C4H medium pass
Grai13G0023330.2 Rosmarinic Acid C4H low borderline
Grai13G0023340.1 Rosmarinic Acid C4H medium pass
Grai13G0027170.1 Rosmarinic Acid C4H medium pass
Graiscaffold_1220000200.1 Rosmarinic Acid C4H low borderline
Graiscaffold_190001280.1 Rosmarinic Acid C4H low borderline
Grai01G0013060.1 Rosmarinic Acid CPR low borderline
Grai01G0013060.3 Rosmarinic Acid CPR low borderline
Grai01G0013060.4 Rosmarinic Acid CPR medium pass
Grai01G0013060.5 Rosmarinic Acid CPR low borderline
Grai01G0013060.6 Rosmarinic Acid CPR low borderline
Grai01G0013060.8 Rosmarinic Acid CPR medium pass
Grai01G0013060.9 Rosmarinic Acid CPR medium pass