PlantSME Plant secondary metabolism enzyme database

Gossypium raimondii (gossypium_raimondii)

Imported from atlas release summary for Gossypium raimondii.

4361
Candidate Protein Records
3434
Pathway-Level Records
8102
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 968 21 BAHD (459) View species results
Phenylpropanoid pathway 784 11 POD (333) View species results
Alkaloid pathway 770 23 NMT (140) View species results
Flavonoid pathway 341 12 UFGT (176) View species results
Steroid pathway 315 13 CAS (138) View species results
Rosmarinic acid pathway 256 7 C4H (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2559 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Grai13G0010340.1 Steroid DWF4/CYP90B1 low borderline
Grai13G0010350.1 Steroid DWF4/CYP90B1 low borderline
Grai13G0010380.1 Steroid DWF4/CYP90B1 low borderline
Grai13G0018020.6 Steroid DWF4/CYP90B1 low borderline
Grai13G0023330.1 Steroid DWF4/CYP90B1 low borderline
Grai13G0023330.2 Steroid DWF4/CYP90B1 low borderline
Grai10G0013110.1 Steroid DWF5 low borderline
Grai10G0013110.2 Steroid DWF5 low borderline
Grai10G0013110.3 Steroid DWF5 low borderline
Grai10G0013110.4 Steroid DWF5 low borderline
Grai11G0000270.1 Steroid DWF5 medium borderline
Grai11G0000270.2 Steroid DWF5 medium borderline
Grai11G0000270.3 Steroid DWF5 medium pass
Grai12G0003810.1 Steroid DWF5 low borderline
Grai12G0003810.2 Steroid DWF5 low borderline
Grai01G0008120.1 Steroid DWF7 medium pass
Grai01G0008120.2 Steroid DWF7 medium pass
Grai01G0008120.3 Steroid DWF7 medium pass
Grai01G0008120.4 Steroid DWF7 medium pass
Grai01G0008120.5 Steroid DWF7 medium pass
Grai01G0008120.6 Steroid DWF7 medium pass
Grai01G0008120.7 Steroid DWF7 medium pass
Grai02G0024270.1 Steroid FK high pass
Grai02G0024270.2 Steroid FK medium pass
Grai02G0024290.1 Steroid FK medium pass
Grai05G0024540.3 Steroid HYD1 low borderline
Grai05G0024540.4 Steroid HYD1 low borderline
Grai05G0024540.8 Steroid HYD1 low borderline
Grai06G0000280.1 Steroid HYD1 high pass
Grai06G0000280.2 Steroid HYD1 high pass
Grai06G0000280.3 Steroid HYD1 high pass
Grai01G0005860.1 Steroid ROT3/CYP90C1 medium borderline
Grai01G0009030.2 Steroid ROT3/CYP90C1 medium borderline
Grai01G0009030.3 Steroid ROT3/CYP90C1 medium borderline
Grai02G0006240.2 Steroid ROT3/CYP90C1 medium borderline
Grai03G0001210.1 Steroid ROT3/CYP90C1 medium borderline
Grai03G0001210.2 Steroid ROT3/CYP90C1 medium borderline
Grai03G0001210.3 Steroid ROT3/CYP90C1 medium borderline
Grai03G0001210.4 Steroid ROT3/CYP90C1 medium borderline
Grai03G0001210.5 Steroid ROT3/CYP90C1 medium borderline
Grai03G0001210.6 Steroid ROT3/CYP90C1 medium borderline
Grai03G0012550.1 Steroid ROT3/CYP90C1 medium borderline
Grai03G0012550.2 Steroid ROT3/CYP90C1 medium borderline
Grai03G0012550.3 Steroid ROT3/CYP90C1 medium borderline
Grai03G0012550.6 Steroid ROT3/CYP90C1 medium borderline
Grai03G0012550.7 Steroid ROT3/CYP90C1 medium borderline
Grai03G0012550.8 Steroid ROT3/CYP90C1 medium borderline
Grai03G0016220.1 Steroid ROT3/CYP90C1 medium borderline
Grai03G0016230.1 Steroid ROT3/CYP90C1 medium borderline
Grai03G0016230.2 Steroid ROT3/CYP90C1 medium borderline