PlantSME Plant secondary metabolism enzyme database

Gossypium raimondii (gossypium_raimondii)

Imported from atlas release summary for Gossypium raimondii.

3434
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 968 21 BAHD (459) View species results
Phenylpropanoid pathway 784 11 POD (333) View species results
Alkaloid pathway 770 23 NMT (140) View species results
Flavonoid pathway 341 12 UFGT (176) View species results
Steroid pathway 315 13 CAS (138) View species results
Rosmarinic acid pathway 256 7 C4H (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2559 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Grai03G0005500.7 Flavonoid ANR medium borderline
Grai04G0010550.9 Flavonoid ANR low borderline
Grai07G0008340.1 Flavonoid ANR medium borderline
Grai07G0008340.2 Flavonoid ANR medium borderline
Grai07G0008350.1 Flavonoid ANR medium borderline
Grai07G0008350.2 Flavonoid ANR medium borderline
Grai07G0008350.4 Flavonoid ANR medium borderline
Grai07G0008350.5 Flavonoid ANR medium borderline
Grai07G0009100.1 Flavonoid ANR medium borderline
Grai07G0010720.2 Flavonoid ANR low borderline
Grai08G0001250.1 Flavonoid ANR medium borderline
Grai08G0005300.1 Flavonoid ANR medium borderline
Grai08G0025320.1 Flavonoid ANR medium borderline
Grai09G0004550.1 Flavonoid ANR medium borderline
Grai09G0004550.2 Flavonoid ANR medium borderline
Grai09G0007360.1 Flavonoid ANR medium borderline
Grai09G0007360.2 Flavonoid ANR medium borderline
Grai09G0012430.1 Flavonoid ANR medium borderline
Grai09G0012430.3 Flavonoid ANR medium borderline
Grai09G0017550.1 Flavonoid ANR medium borderline
Grai09G0017550.2 Flavonoid ANR medium borderline
Grai09G0017550.3 Flavonoid ANR medium borderline
Grai09G0017550.4 Flavonoid ANR medium borderline
Grai09G0017550.5 Flavonoid ANR medium borderline
Grai09G0020060.1 Flavonoid ANR medium borderline
Grai09G0020060.10 Flavonoid ANR medium borderline
Grai09G0020060.11 Flavonoid ANR medium borderline
Grai09G0020060.2 Flavonoid ANR medium borderline
Grai09G0020060.3 Flavonoid ANR medium borderline
Grai09G0020060.4 Flavonoid ANR medium borderline
Grai09G0020060.6 Flavonoid ANR medium borderline
Grai09G0020060.9 Flavonoid ANR medium borderline
Grai09G0036010.1 Flavonoid ANR low borderline
Grai10G0000890.1 Flavonoid ANR medium borderline
Grai10G0000890.2 Flavonoid ANR medium borderline
Grai10G0000890.3 Flavonoid ANR medium borderline
Grai10G0000890.4 Flavonoid ANR medium borderline
Grai10G0000890.5 Flavonoid ANR medium borderline
Grai10G0009320.1 Flavonoid ANR low borderline
Grai10G0009320.2 Flavonoid ANR low borderline
Grai10G0009320.3 Flavonoid ANR low borderline
Grai10G0009320.4 Flavonoid ANR low borderline
Grai10G0009320.5 Flavonoid ANR low borderline
Grai10G0009320.6 Flavonoid ANR low borderline
Grai10G0020610.1 Flavonoid ANR low borderline
Grai10G0020840.1 Flavonoid ANR low borderline
Grai10G0020900.1 Flavonoid ANR low borderline
Grai10G0021080.1 Flavonoid ANR low borderline
Grai10G0021180.1 Flavonoid ANR low borderline
Grai12G0006220.1 Flavonoid ANR low borderline