PlantSME Plant secondary metabolism enzyme database

Gossypium raimondii (gossypium_raimondii)

Imported from atlas release summary for Gossypium raimondii.

4361
Candidate Protein Records
3434
Pathway-Level Records
8102
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 968 21 BAHD (459) View species results
Phenylpropanoid pathway 784 11 POD (333) View species results
Alkaloid pathway 770 23 NMT (140) View species results
Flavonoid pathway 341 12 UFGT (176) View species results
Steroid pathway 315 13 CAS (138) View species results
Rosmarinic acid pathway 256 7 C4H (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2559 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Grai09G0020400.1 Rosmarinic Acid C4H low borderline
Grai09G0020650.1 Rosmarinic Acid C4H low borderline
Grai09G0020660.1 Rosmarinic Acid C4H low borderline
Grai09G0020670.1 Rosmarinic Acid C4H low borderline
Grai09G0020690.1 Rosmarinic Acid C4H low borderline
Grai09G0020700.1 Rosmarinic Acid C4H low borderline
Grai09G0020710.1 Rosmarinic Acid C4H low borderline
Grai09G0020750.1 Rosmarinic Acid C4H low borderline
Grai09G0021190.1 Rosmarinic Acid C4H low borderline
Grai09G0021650.1 Rosmarinic Acid C4H low borderline
Grai09G0021700.1 Rosmarinic Acid C4H medium pass
Grai09G0027490.1 Rosmarinic Acid C4H medium pass
Grai09G0027690.1 Rosmarinic Acid C4H low borderline
Grai09G0029390.1 Rosmarinic Acid C4H low borderline
Grai09G0031020.1 Rosmarinic Acid C4H low borderline
Grai09G0033160.1 Rosmarinic Acid C4H low borderline
Grai09G0035840.1 Rosmarinic Acid C4H medium pass
Grai09G0035860.1 Rosmarinic Acid C4H low borderline
Grai09G0035860.2 Rosmarinic Acid C4H medium pass
Grai09G0035880.1 Rosmarinic Acid C4H low borderline
Grai09G0035900.1 Rosmarinic Acid C4H medium pass
Grai09G0035900.2 Rosmarinic Acid C4H medium pass
Grai09G0035910.1 Rosmarinic Acid C4H medium pass
Grai09G0040900.1 Rosmarinic Acid C4H low borderline
Grai09G0042460.1 Rosmarinic Acid C4H low borderline
Grai09G0042470.1 Rosmarinic Acid C4H low borderline
Grai09G0042480.1 Rosmarinic Acid C4H low borderline
Grai09G0042490.1 Rosmarinic Acid C4H low borderline
Grai09G0043480.1 Rosmarinic Acid C4H medium pass
Grai10G0000860.1 Rosmarinic Acid C4H low borderline
Grai10G0001420.1 Rosmarinic Acid C4H low borderline
Grai10G0001420.2 Rosmarinic Acid C4H low borderline
Grai10G0001420.3 Rosmarinic Acid C4H low borderline
Grai10G0001420.4 Rosmarinic Acid C4H low borderline
Grai10G0001430.1 Rosmarinic Acid C4H low borderline
Grai10G0001440.1 Rosmarinic Acid C4H low borderline
Grai10G0001450.1 Rosmarinic Acid C4H low borderline
Grai10G0001460.1 Rosmarinic Acid C4H low borderline
Grai10G0001470.1 Rosmarinic Acid C4H low borderline
Grai10G0001480.1 Rosmarinic Acid C4H low borderline
Grai10G0001490.1 Rosmarinic Acid C4H low borderline
Grai10G0001500.1 Rosmarinic Acid C4H low borderline
Grai10G0001510.1 Rosmarinic Acid C4H low borderline
Grai10G0001520.1 Rosmarinic Acid C4H low borderline
Grai10G0001530.1 Rosmarinic Acid C4H low borderline
Grai10G0001540.1 Rosmarinic Acid C4H low borderline
Grai10G0001590.1 Rosmarinic Acid C4H low borderline
Grai10G0001590.2 Rosmarinic Acid C4H low borderline
Grai10G0001590.3 Rosmarinic Acid C4H low borderline
Grai10G0002440.1 Rosmarinic Acid C4H medium pass