PlantSME Plant secondary metabolism enzyme database

Grimmia obtusifolia (grimmia_obtusifolia)

Imported from atlas release summary for Grimmia obtusifolia.

634
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 170 11 POD (85) View species results
Terpenoid pathway 153 19 BAHD (60) View species results
Alkaloid pathway 132 16 NMT (22) View species results
Flavonoid pathway 80 9 UFGT (23) View species results
Rosmarinic acid pathway 60 7 C4H (19) View species results
Steroid pathway 39 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 643 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
GobtHiC_scaffold_110047690 Alkaloid 8HGO low borderline
GobtHiC_scaffold_110054980 Alkaloid 8HGO medium borderline
GobtHiC_scaffold_120068350 Alkaloid 8HGO medium borderline
GobtHiC_scaffold_70219260 Alkaloid 8HGO medium borderline
GobtHiC_scaffold_70232060 Alkaloid 8HGO medium borderline
GobtHiC_scaffold_80263650 Alkaloid 8HGO medium borderline
GobtHiC_scaffold_100037030 Alkaloid ADC medium pass
GobtHiC_scaffold_20108460 Alkaloid ADC medium pass
GobtHiC_scaffold_30157660 Alkaloid ADC low borderline
GobtHiC_scaffold_90302370 Alkaloid ADC medium pass
GobtHiC_scaffold_10002590 Alkaloid BBE low borderline
GobtHiC_scaffold_20101700 Alkaloid BBE low borderline
GobtHiC_scaffold_30156800 Alkaloid BBE low borderline
GobtHiC_scaffold_70217630 Alkaloid BBE medium borderline
GobtHiC_scaffold_110044510 Alkaloid CNMT low borderline
GobtHiC_scaffold_120062360 Alkaloid CNMT low borderline
GobtHiC_scaffold_120066830 Alkaloid CNMT low borderline
GobtHiC_scaffold_30143380 Alkaloid CNMT low borderline
GobtHiC_scaffold_30152600 Alkaloid CNMT low borderline
GobtHiC_scaffold_70219400 Alkaloid CNMT low borderline
GobtHiC_scaffold_80250380 Alkaloid CNMT medium borderline
GobtHiC_scaffold_80256960 Alkaloid CNMT low borderline
GobtHiC_scaffold_90281290 Alkaloid CNMT low borderline
GobtHiC_scaffold_90287360 Alkaloid CNMT low borderline
GobtHiC_scaffold_90297940 Alkaloid CNMT low borderline
GobtHiC_scaffold_10000620 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_100025640 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_100027120 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_100027510 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_100033550 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_100033640 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_100036440 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_110048610 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_110053300 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_110055430 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_120060760 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_120065930 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_120073200 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_120077600 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_130087720 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_30138820 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_30141670 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_50192970 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_50194920 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_60211260 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_70219580 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_70222720 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_80256140 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_90280860 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_90288000 Alkaloid CODM/T6ODM medium borderline