PlantSME Plant secondary metabolism enzyme database

Grimmia obtusifolia (grimmia_obtusifolia)

Imported from atlas release summary for Grimmia obtusifolia.

634
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 170 11 POD (85) View species results
Terpenoid pathway 153 19 BAHD (60) View species results
Alkaloid pathway 132 16 NMT (22) View species results
Flavonoid pathway 80 9 UFGT (23) View species results
Rosmarinic acid pathway 60 7 C4H (19) View species results
Steroid pathway 39 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 643 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
GobtHiC_scaffold_90290680 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_90297720 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_90300140 Alkaloid CODM/T6ODM medium borderline
GobtHiC_scaffold_100031910 Alkaloid COR medium pass
GobtHiC_scaffold_10006830 Alkaloid COR medium pass
GobtHiC_scaffold_110044990 Alkaloid COR medium pass
GobtHiC_scaffold_120061210 Alkaloid COR medium pass
GobtHiC_scaffold_30147260 Alkaloid COR medium pass
GobtHiC_scaffold_50186620 Alkaloid COR medium pass
GobtHiC_scaffold_60213400 Alkaloid COR low borderline
GobtHiC_scaffold_70233580 Alkaloid COR medium pass
GobtHiC_scaffold_100022890 Alkaloid CYP719 low borderline
GobtHiC_scaffold_30143230 Alkaloid CYP719 medium borderline
GobtHiC_scaffold_40175340 Alkaloid CYP719 medium borderline
GobtHiC_scaffold_70243430 Alkaloid CYP719 low borderline
GobtHiC_scaffold_100032070 Alkaloid CYP80B1 medium borderline
GobtHiC_scaffold_110048880 Alkaloid CYP80B1 medium borderline
GobtHiC_scaffold_120077850 Alkaloid CYP80B1 low borderline
GobtHiC_scaffold_13680088250 Alkaloid CYP80B1 medium borderline
GobtHiC_scaffold_20108660 Alkaloid CYP80B1 medium borderline
GobtHiC_scaffold_100022590 Alkaloid G8O/G8H medium borderline
GobtHiC_scaffold_100022600 Alkaloid G8O/G8H low borderline
GobtHiC_scaffold_100029330 Alkaloid G8O/G8H medium pass
GobtHiC_scaffold_100032060 Alkaloid G8O/G8H medium borderline
GobtHiC_scaffold_10012450 Alkaloid G8O/G8H medium borderline
GobtHiC_scaffold_20119830 Alkaloid G8O/G8H medium borderline
GobtHiC_scaffold_20123730 Alkaloid G8O/G8H low borderline
GobtHiC_scaffold_30149170 Alkaloid G8O/G8H medium borderline
GobtHiC_scaffold_40177310 Alkaloid G8O/G8H medium borderline
GobtHiC_scaffold_40178570 Alkaloid G8O/G8H medium borderline
GobtHiC_scaffold_60199250 Alkaloid G8O/G8H medium borderline
GobtHiC_scaffold_60211720 Alkaloid G8O/G8H medium borderline
GobtHiC_scaffold_90300320 Alkaloid G8O/G8H medium borderline
GobtHiC_scaffold_20110830 Alkaloid GES low borderline
GobtHiC_scaffold_100037790 Alkaloid GS low borderline
GobtHiC_scaffold_10005690 Alkaloid GS high pass
GobtHiC_scaffold_10008170 Alkaloid GS high pass
GobtHiC_scaffold_10008180 Alkaloid GS high pass
GobtHiC_scaffold_10010580 Alkaloid GS medium pass
GobtHiC_scaffold_120071730 Alkaloid GS low borderline
GobtHiC_scaffold_120072300 Alkaloid GS low borderline
GobtHiC_scaffold_120072450 Alkaloid GS low borderline
GobtHiC_scaffold_130084350 Alkaloid GS medium pass
GobtHiC_scaffold_130086400 Alkaloid GS low borderline
GobtHiC_scaffold_180100340 Alkaloid GS low borderline
GobtHiC_scaffold_20115410 Alkaloid GS medium pass
GobtHiC_scaffold_30138550 Alkaloid GS low borderline
GobtHiC_scaffold_30156880 Alkaloid GS low borderline
GobtHiC_scaffold_40175400 Alkaloid GS low borderline
GobtHiC_scaffold_40179990 Alkaloid GS low borderline