Grimmia obtusifolia (grimmia_obtusifolia)
Imported from atlas release summary for Grimmia obtusifolia.
634
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
634
Candidate Genes
C4H
7.21%
C3'H/CYP98A
5.84%
BAHD
5.72%
POD
5.36%
4CL
5.01%
CYP76
4.05%
NMT
3.75%
IFS
3.34%
Other Families
59.71%
More Families (94)
T3O
41
2.44%
STR
41
2.44%
DWF4/CYP90B1
41
2.44%
F3H
40
2.38%
IFR
40
2.38%
F3'H/CYP75B
35
2.09%
BR6OX2/CYP85A2
34
2.03%
PAL
30
1.79%
UGT
30
1.79%
GS
29
1.73%
CODM/T6ODM
28
1.67%
7DLGT
28
1.67%
UFGT
28
1.67%
PYKS
27
1.61%
IO
24
1.43%
CYP71
21
1.25%
CAD
19
1.13%
H6H
18
1.07%
SMT1/SMT2/SMT3
18
1.07%
CHS
17
1.01%
T16H
15
0.89%
TRI/TRII
15
0.89%
F3'5'H/CYP75A
15
0.89%
HCT
15
0.89%
LAC
15
0.89%
RAS
15
0.89%
COMT
14
0.83%
G8O/G8H
13
0.77%
SLS
13
0.77%
CAS
12
0.72%
CNMT
11
0.66%
CSE
11
0.66%
SGD
10
0.6%
FNS
10
0.6%
7DLH
9
0.54%
8HGO
9
0.54%
CCR
9
0.54%
COR
8
0.48%
16OMT
8
0.48%
ANR
8
0.48%
CYP90D1
8
0.48%
NCS
7
0.42%
TDC
7
0.42%
SQS/FDFT1
7
0.42%
PMT
6
0.36%
DET2
6
0.36%
CPD/CYP90A1
6
0.36%
MVK
6
0.36%
AACT
6
0.36%
CYP80B1
5
0.3%
ANS/LDOX
5
0.3%
F5H/CYP84A
5
0.3%
CPR
5
0.3%
BR6OX1/CYP85A1
5
0.3%
GGPPS
5
0.3%
LAMT
4
0.24%
CYP719
4
0.24%
BBE
4
0.24%
ADC
4
0.24%
FLS
4
0.24%
TAT
4
0.24%
DWF5
4
0.24%
SQE
4
0.24%
ROT3/CYP90C1
4
0.24%
MPO
3
0.18%
DFR
3
0.18%
CHI
3
0.18%
SMO1/SMO2
3
0.18%
MVD
3
0.18%
6OMT_4OMT_SOMT
2
0.12%
ISY
2
0.12%
TYDC_DDC
2
0.12%
CCoAOMT
2
0.12%
HPPR
2
0.12%
CYP51G1
2
0.12%
HYD1
2
0.12%
FPPS
2
0.12%
HDS/IspG
2
0.12%
MCT/IspD
2
0.12%
DXR
2
0.12%
MDS/IspF
2
0.12%
HDR/IspH
2
0.12%
GES
1
0.06%
DWF7
1
0.06%
DWF1
1
0.06%
CPI1
1
0.06%
FK
1
0.06%
IDI
1
0.06%
CMK/IspE
1
0.06%
TPS
1
0.06%
DXS
1
0.06%
HMGR
1
0.06%
PMK
1
0.06%
HMGS
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 170 | 11 | POD (85) | View species results |
| Terpenoid pathway | 153 | 19 | BAHD (60) | View species results |
| Alkaloid pathway | 132 | 16 | NMT (22) | View species results |
| Flavonoid pathway | 80 | 9 | UFGT (23) | View species results |
| Rosmarinic acid pathway | 60 | 7 | C4H (19) | View species results |
| Steroid pathway | 39 | 13 | CAS (9) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 643 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 126 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| GobtHiC_scaffold_130086720 | Terpenoid | CYP76 | low | borderline | CYP76__00024__sp_W0FKI0_DOX1_PERHD |
| GobtHiC_scaffold_130086730 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| GobtHiC_scaffold_130086880 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| GobtHiC_scaffold_20108660 | Terpenoid | CYP76 | medium | pass | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| GobtHiC_scaffold_20108670 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| GobtHiC_scaffold_20119830 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| GobtHiC_scaffold_20119840 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| GobtHiC_scaffold_20123720 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| GobtHiC_scaffold_20126340 | Terpenoid | CYP76 | medium | borderline | CYP76__00018__sp_Q69X58_C76M7_ORYSJ |
| GobtHiC_scaffold_30143510 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| GobtHiC_scaffold_30149170 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| GobtHiC_scaffold_30157240 | Terpenoid | CYP76 | medium | pass | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| GobtHiC_scaffold_40175340 | Terpenoid | CYP76 | medium | pass | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| GobtHiC_scaffold_40177310 | Terpenoid | CYP76 | medium | borderline | CYP76__00019__sp_Q6YTF1_C76M8_ORYSJ |
| GobtHiC_scaffold_40178560 | Terpenoid | CYP76 | medium | borderline | CYP76__00014__sp_I3PFJ5_C76AD_BETVU |
| GobtHiC_scaffold_40178570 | Terpenoid | CYP76 | medium | pass | CYP76__00005__sp_A0A125QZE2_C76K1_SALMI |
| GobtHiC_scaffold_50184120 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| GobtHiC_scaffold_50186960 | Terpenoid | CYP76 | medium | pass | CYP76__00005__sp_A0A125QZE2_C76K1_SALMI |
| GobtHiC_scaffold_50187320 | Terpenoid | CYP76 | medium | pass | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| GobtHiC_scaffold_50187330 | Terpenoid | CYP76 | medium | pass | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| GobtHiC_scaffold_50187490 | Terpenoid | CYP76 | medium | pass | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| GobtHiC_scaffold_50194730 | Terpenoid | CYP76 | low | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| GobtHiC_scaffold_60199250 | Terpenoid | CYP76 | medium | pass | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| GobtHiC_scaffold_60202220 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| GobtHiC_scaffold_60210450 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| GobtHiC_scaffold_60211290 | Terpenoid | CYP76 | low | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| GobtHiC_scaffold_60211720 | Terpenoid | CYP76 | medium | pass | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| GobtHiC_scaffold_70216500 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| GobtHiC_scaffold_70226190 | Terpenoid | CYP76 | low | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| GobtHiC_scaffold_70232440 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| GobtHiC_scaffold_70238890 | Terpenoid | CYP76 | low | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| GobtHiC_scaffold_70239250 | Terpenoid | CYP76 | low | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| GobtHiC_scaffold_70239470 | Terpenoid | CYP76 | medium | pass | CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI |
| GobtHiC_scaffold_70244470 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| GobtHiC_scaffold_80250130 | Terpenoid | CYP76 | medium | pass | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| GobtHiC_scaffold_80257630 | Terpenoid | CYP76 | medium | pass | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| GobtHiC_scaffold_80263170 | Terpenoid | CYP76 | low | borderline | CYP76__00024__sp_W0FKI0_DOX1_PERHD |
| GobtHiC_scaffold_90278010 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| GobtHiC_scaffold_90280750 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| GobtHiC_scaffold_90286980 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| GobtHiC_scaffold_90300320 | Terpenoid | CYP76 | medium | pass | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| GobtHiC_scaffold_90302000 | Terpenoid | CYP76 | medium | pass | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| GobtHiC_scaffold_20119020 | Terpenoid | DXR | high | pass | DXR__00001__sp_Q9XFS9_DXR_ARATH |
| GobtHiC_scaffold_60208600 | Terpenoid | DXR | high | pass | DXR__00001__sp_Q9XFS9_DXR_ARATH |
| GobtHiC_scaffold_50184940 | Terpenoid | DXS | medium | pass | DXS__00001__sp_Q38854_DXS_ARATH |
| GobtHiC_scaffold_10005920 | Terpenoid | FPPS | medium | pass | FPPS__00001__sp_B8XA40_ZFPS_SOLHA |
| GobtHiC_scaffold_20112330 | Terpenoid | FPPS | medium | pass | FPPS__00008__sp_Q4JHN6_FPS_PANGI |
| GobtHiC_scaffold_100026420 | Terpenoid | GGPPS | medium | borderline | GGPPS__00001__sp_Q8S948_SPS1_ARATH |
| GobtHiC_scaffold_10002850 | Terpenoid | GGPPS | medium | borderline | GGPPS__00001__sp_Q8S948_SPS1_ARATH |
| GobtHiC_scaffold_120063130 | Terpenoid | GGPPS | medium | borderline | GGPPS__00001__sp_Q8S948_SPS1_ARATH |