PlantSME Plant secondary metabolism enzyme database

Grimmia obtusifolia (grimmia_obtusifolia)

Imported from atlas release summary for Grimmia obtusifolia.

634
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 170 11 POD (85) View species results
Terpenoid pathway 153 19 BAHD (60) View species results
Alkaloid pathway 132 16 NMT (22) View species results
Flavonoid pathway 80 9 UFGT (23) View species results
Rosmarinic acid pathway 60 7 C4H (19) View species results
Steroid pathway 39 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 643 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
GobtHiC_scaffold_120067360 Terpenoid GGPPS medium borderline
GobtHiC_scaffold_90295460 Terpenoid GGPPS medium borderline
GobtHiC_scaffold_60214820 Terpenoid HDR/IspH high pass
GobtHiC_scaffold_80256660 Terpenoid HDR/IspH low borderline
GobtHiC_scaffold_120075950 Terpenoid HDS/IspG high pass
GobtHiC_scaffold_20105490 Terpenoid HDS/IspG low borderline
GobtHiC_scaffold_50190320 Terpenoid HMGR medium pass
GobtHiC_scaffold_90281640 Terpenoid HMGS high pass
GobtHiC_scaffold_10009050 Terpenoid IDI medium pass
GobtHiC_scaffold_20112270 Terpenoid MCT/IspD high pass
GobtHiC_scaffold_40180350 Terpenoid MCT/IspD high pass
GobtHiC_scaffold_30140580 Terpenoid MDS/IspF high pass
GobtHiC_scaffold_70225680 Terpenoid MDS/IspF high pass
GobtHiC_scaffold_100028080 Terpenoid MVD medium pass
GobtHiC_scaffold_40174340 Terpenoid MVD low borderline
GobtHiC_scaffold_40174820 Terpenoid MVD low borderline
GobtHiC_scaffold_100027460 Terpenoid MVK low borderline
GobtHiC_scaffold_130085670 Terpenoid MVK low borderline
GobtHiC_scaffold_130085750 Terpenoid MVK low borderline
GobtHiC_scaffold_20103050 Terpenoid MVK medium pass
GobtHiC_scaffold_40168390 Terpenoid MVK low borderline
GobtHiC_scaffold_90289140 Terpenoid MVK low borderline
GobtHiC_scaffold_90277460 Terpenoid PMK medium pass
GobtHiC_scaffold_20110830 Terpenoid TPS medium pass
GobtHiC_scaffold_100028310 Terpenoid UGT medium pass
GobtHiC_scaffold_100029700 Terpenoid UGT medium pass
GobtHiC_scaffold_100032240 Terpenoid UGT medium pass
GobtHiC_scaffold_100033800 Terpenoid UGT medium pass
GobtHiC_scaffold_100033820 Terpenoid UGT medium pass
GobtHiC_scaffold_100037050 Terpenoid UGT medium pass
GobtHiC_scaffold_100038920 Terpenoid UGT low borderline
GobtHiC_scaffold_10015600 Terpenoid UGT medium pass
GobtHiC_scaffold_110051790 Terpenoid UGT medium pass
GobtHiC_scaffold_120066390 Terpenoid UGT medium pass
GobtHiC_scaffold_130080580 Terpenoid UGT medium pass
GobtHiC_scaffold_20101230 Terpenoid UGT medium pass
GobtHiC_scaffold_20106010 Terpenoid UGT medium pass
GobtHiC_scaffold_20107310 Terpenoid UGT medium pass
GobtHiC_scaffold_20115510 Terpenoid UGT medium pass
GobtHiC_scaffold_20123560 Terpenoid UGT medium pass
GobtHiC_scaffold_30152370 Terpenoid UGT medium pass
GobtHiC_scaffold_40178390 Terpenoid UGT medium pass
GobtHiC_scaffold_50182670 Terpenoid UGT low borderline
GobtHiC_scaffold_50188070 Terpenoid UGT medium pass
GobtHiC_scaffold_50197040 Terpenoid UGT medium pass
GobtHiC_scaffold_60209740 Terpenoid UGT medium pass
GobtHiC_scaffold_70217930 Terpenoid UGT medium pass
GobtHiC_scaffold_70219030 Terpenoid UGT medium pass
GobtHiC_scaffold_80254580 Terpenoid UGT low borderline
GobtHiC_scaffold_80254590 Terpenoid UGT medium pass