PlantSME Plant secondary metabolism enzyme database

Leucobryum bowringii (leucobryum_bowringii)

Imported from atlas release summary for Leucobryum bowringii.

694
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 184 10 POD (78) View species results
Terpenoid pathway 155 19 BAHD (59) View species results
Alkaloid pathway 141 17 NMT (27) View species results
Flavonoid pathway 88 10 UFGT (25) View species results
Rosmarinic acid pathway 80 7 C4H (38) View species results
Steroid pathway 46 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 878 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Lbowcontig_10004770 Terpenoid AACT medium borderline
Lbowcontig_10006530 Terpenoid AACT medium borderline
Lbowcontig_200210920 Terpenoid AACT low borderline
Lbowcontig_40235820 Terpenoid AACT medium borderline
Lbowcontig_50265310 Terpenoid AACT low borderline
Lbowcontig_60306290 Terpenoid AACT medium borderline
Lbowcontig_80341290 Terpenoid AACT low borderline
Lbowcontig_90355390 Terpenoid AACT medium borderline
Lbowcontig_100024990 Terpenoid BAHD low borderline
Lbowcontig_100026300 Terpenoid BAHD medium pass
Lbowcontig_100033680 Terpenoid BAHD medium pass
Lbowcontig_100034470 Terpenoid BAHD medium pass
Lbowcontig_10005750 Terpenoid BAHD medium pass
Lbowcontig_10007530 Terpenoid BAHD low borderline
Lbowcontig_10007590 Terpenoid BAHD low borderline
Lbowcontig_10010100 Terpenoid BAHD low borderline
Lbowcontig_10012810 Terpenoid BAHD low borderline
Lbowcontig_120050790 Terpenoid BAHD medium pass
Lbowcontig_120056660 Terpenoid BAHD medium pass
Lbowcontig_120057020 Terpenoid BAHD medium pass
Lbowcontig_120058210 Terpenoid BAHD medium pass
Lbowcontig_120059220 Terpenoid BAHD medium pass
Lbowcontig_120063180 Terpenoid BAHD medium pass
Lbowcontig_120067700 Terpenoid BAHD medium pass
Lbowcontig_120075430 Terpenoid BAHD medium pass
Lbowcontig_120088030 Terpenoid BAHD low borderline
Lbowcontig_140096670 Terpenoid BAHD low borderline
Lbowcontig_140096700 Terpenoid BAHD low borderline
Lbowcontig_140096940 Terpenoid BAHD medium pass
Lbowcontig_140097940 Terpenoid BAHD medium pass
Lbowcontig_140099610 Terpenoid BAHD medium pass
Lbowcontig_140099690 Terpenoid BAHD low borderline
Lbowcontig_140100590 Terpenoid BAHD low borderline
Lbowcontig_140100980 Terpenoid BAHD medium pass
Lbowcontig_140102210 Terpenoid BAHD medium pass
Lbowcontig_150104700 Terpenoid BAHD low borderline
Lbowcontig_150106530 Terpenoid BAHD low borderline
Lbowcontig_150110670 Terpenoid BAHD medium pass
Lbowcontig_160123950 Terpenoid BAHD medium pass
Lbowcontig_160124040 Terpenoid BAHD medium pass
Lbowcontig_160124120 Terpenoid BAHD low borderline
Lbowcontig_160125300 Terpenoid BAHD medium pass
Lbowcontig_160126070 Terpenoid BAHD low borderline
Lbowcontig_160130590 Terpenoid BAHD medium pass
Lbowcontig_170148840 Terpenoid BAHD low borderline
Lbowcontig_190153240 Terpenoid BAHD medium pass
Lbowcontig_190154590 Terpenoid BAHD medium pass
Lbowcontig_190154690 Terpenoid BAHD low borderline
Lbowcontig_190158700 Terpenoid BAHD low borderline
Lbowcontig_190160590 Terpenoid BAHD medium pass