Leucobryum bowringii (leucobryum_bowringii)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Phenylpropanoid pathway 26.51% Terpenoid pathway 22.33% Alkaloid pathway 20.32% Flavonoid pathway 12.68% Rosmarinic acid pathway 11.53% Steroid pathway 6.63%

Family Distribution

694 Candidate Genes

C4H 7.52% C3'H/CYP98A 6.86% CYP76 5.81% BAHD 4.71% 4CL 4.56% POD 4.21% IFS 4.11% NMT 3.46%

Other Families 58.77%

More Families (95)

BR6OX2/CYP85A2 59 2.96% DWF4/CYP90B1 52 2.61% T3O 51 2.56% STR 45 2.25% PAL 45 2.25% IO 44 2.2% F3H 43 2.15% IFR 40 2.0% F3'H/CYP75B 39 1.95% CODM/T6ODM 34 1.7% PYKS 31 1.55% GS 30 1.5% UGT 30 1.5% UFGT 29 1.45% 7DLGT 27 1.35% SMT1/SMT2/SMT3 24 1.2% LAC 23 1.15% COMT 22 1.1% G8O/G8H 21 1.05% T16H 21 1.05% CHS 20 1.0% F3'5'H/CYP75A 20 1.0% CAD 19 0.95% CAS 18 0.9% TRI/TRII 17 0.85% CSE 16 0.8% CYP71 15 0.75% SGD 14 0.7% SLS 13 0.65% 16OMT 13 0.65% FNS 13 0.65% CNMT 12 0.6% LAMT 12 0.6% H6H 12 0.6% HCT 11 0.55% RAS 11 0.55% CPD/CYP90A1 9 0.45% 8HGO 8 0.4% COR 8 0.4% NCS 8 0.4% CYP51G1 8 0.4% SQS/FDFT1 8 0.4% AACT 8 0.4% 7DLH 7 0.35% CYP80B1 7 0.35% ANR 7 0.35% DET2 7 0.35% F5H/CYP84A 6 0.3% BR6OX1/CYP85A1 6 0.3% CYP90D1 6 0.3% BBE 5 0.25% PMT 5 0.25% TDC 5 0.25% CCR 5 0.25% TAT 5 0.25% ROT3/CYP90C1 5 0.25% DWF5 5 0.25% FPPS 5 0.25% MVK 5 0.25% CYP719 4 0.2% MPO 4 0.2% DFR 4 0.2% CHI 4 0.2% ANS/LDOX 4 0.2% CPR 4 0.2% TPS 4 0.2% GGPPS 4 0.2% GES 3 0.15% ISY 3 0.15% 6OMT_4OMT_SOMT 3 0.15% ADC 3 0.15% HPPR 3 0.15% SQE 3 0.15% CCoAOMT 2 0.1% SMO1/SMO2 2 0.1% MCT/IspD 2 0.1% MVD 2 0.1% HMGS 2 0.1% HDS/IspG 2 0.1% DXS 2 0.1% TYDC_DDC 1 0.05% FLS 1 0.05% HYD1 1 0.05% DWF1 1 0.05% FK 1 0.05% CPI1 1 0.05% DWF7 1 0.05% MDS/IspF 1 0.05% PMK 1 0.05% DXR 1 0.05% CMK/IspE 1 0.05% GPPS 1 0.05% IDI 1 0.05% HDR/IspH 1 0.05% HMGR 1 0.05%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Phenylpropanoid pathway	184	10	POD (78)	View species results
Terpenoid pathway	155	19	BAHD (59)	View species results
Alkaloid pathway	141	17	NMT (27)	View species results
Flavonoid pathway	88	10	UFGT (25)	View species results
Rosmarinic acid pathway	80	7	C4H (38)	View species results
Steroid pathway	46	12	CAS (16)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	23	878	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	116	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current pathway filter: Terpenoid pathway

Gene	Pathway	Family	Confidence	Status	Best Target
Lbowcontig_190164730	Terpenoid	BAHD	medium	pass	BAHD__00040__sp_Q41745_LPAT_MAIZE
Lbowcontig_200174320	Terpenoid	BAHD	medium	pass	BAHD__00030__sp_O80816_GLC_ARATH
Lbowcontig_200174820	Terpenoid	BAHD	medium	pass	BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
Lbowcontig_200178230	Terpenoid	BAHD	medium	pass	BAHD__00043__sp_Q52T38_ZDH22_ARATH
Lbowcontig_200180400	Terpenoid	BAHD	medium	pass	BAHD__00097__sp_Q9ZV87_NAPES_ARATH
Lbowcontig_200183680	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Lbowcontig_200184340	Terpenoid	BAHD	medium	pass	BAHD__00030__sp_O80816_GLC_ARATH
Lbowcontig_200192040	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Lbowcontig_200196030	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
Lbowcontig_200197110	Terpenoid	BAHD	low	borderline	BAHD__00042__sp_Q500Z2_ZDH20_ARATH
Lbowcontig_200200730	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Lbowcontig_200203090	Terpenoid	BAHD	medium	pass	BAHD__00058__sp_Q8LG50_LPAT2_ARATH
Lbowcontig_200208730	Terpenoid	BAHD	medium	pass	BAHD__00014__sp_B9RK42_GPC1_RICCO
Lbowcontig_210212050	Terpenoid	BAHD	medium	pass	BAHD__00044__sp_Q56WD9_THIK2_ARATH
Lbowcontig_220216050	Terpenoid	BAHD	low	borderline	BAHD__00097__sp_Q9ZV87_NAPES_ARATH
Lbowcontig_220216690	Terpenoid	BAHD	low	borderline	BAHD__00018__sp_I1MRZ6_DAT32_SOYBN
Lbowcontig_220219260	Terpenoid	BAHD	medium	pass	BAHD__00027__sp_O80437_GPAT6_ARATH
Lbowcontig_40233150	Terpenoid	BAHD	low	borderline	BAHD__00093__sp_Q9SV07_ASAT1_ARATH
Lbowcontig_40234020	Terpenoid	BAHD	medium	pass	BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
Lbowcontig_40236540	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Lbowcontig_40236730	Terpenoid	BAHD	medium	pass	BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
Lbowcontig_40251000	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
Lbowcontig_40251830	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Lbowcontig_40254850	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Lbowcontig_40254880	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Lbowcontig_50260480	Terpenoid	BAHD	low	borderline	BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Lbowcontig_50260790	Terpenoid	BAHD	medium	pass	BAHD__00027__sp_O80437_GPAT6_ARATH
Lbowcontig_50282790	Terpenoid	BAHD	medium	pass	BAHD__00062__sp_Q93V61_LCAT3_ARATH
Lbowcontig_60301220	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Lbowcontig_60302130	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Lbowcontig_60305530	Terpenoid	BAHD	low	borderline	BAHD__00093__sp_Q9SV07_ASAT1_ARATH
Lbowcontig_60310960	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Lbowcontig_60312290	Terpenoid	BAHD	medium	pass	BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
Lbowcontig_60317410	Terpenoid	BAHD	medium	pass	BAHD__00023__sp_O22975_LPAAT_ARATH
Lbowcontig_60321060	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
Lbowcontig_80324160	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Lbowcontig_80325370	Terpenoid	BAHD	medium	pass	BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
Lbowcontig_80330940	Terpenoid	BAHD	medium	pass	BAHD__00030__sp_O80816_GLC_ARATH
Lbowcontig_80332030	Terpenoid	BAHD	low	borderline	BAHD__00020__sp_K4D9Y4_ASAT3_SOLLC
Lbowcontig_80332040	Terpenoid	BAHD	low	borderline	BAHD__00002__sp_A0A068BIF1_AT9_ACTER
Lbowcontig_80340220	Terpenoid	BAHD	medium	pass	BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
Lbowcontig_80341250	Terpenoid	BAHD	medium	pass	BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Lbowcontig_80341300	Terpenoid	BAHD	low	borderline	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Lbowcontig_80341330	Terpenoid	BAHD	low	borderline	BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC
Lbowcontig_80341340	Terpenoid	BAHD	low	borderline	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Lbowcontig_80344230	Terpenoid	BAHD	medium	pass	BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
Lbowcontig_90351190	Terpenoid	BAHD	medium	pass	BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Lbowcontig_90351220	Terpenoid	BAHD	medium	pass	BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Lbowcontig_90351810	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
Lbowcontig_90352170	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH