PlantSME Plant secondary metabolism enzyme database

Leucobryum bowringii (leucobryum_bowringii)

Imported from atlas release summary for Leucobryum bowringii.

998
Candidate Protein Records
694
Pathway-Level Records
1996
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 184 10 POD (78) View species results
Terpenoid pathway 155 19 BAHD (59) View species results
Alkaloid pathway 141 17 NMT (27) View species results
Flavonoid pathway 88 10 UFGT (25) View species results
Rosmarinic acid pathway 80 7 C4H (38) View species results
Steroid pathway 46 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 878 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lbowcontig_220217570 Rosmarinic Acid C4H low borderline
Lbowcontig_220218790 Rosmarinic Acid C4H low borderline
Lbowcontig_220218880 Rosmarinic Acid C4H low borderline
Lbowcontig_30221610 Rosmarinic Acid C4H low borderline
Lbowcontig_40242390 Rosmarinic Acid C4H medium pass
Lbowcontig_40244170 Rosmarinic Acid C4H medium pass
Lbowcontig_40246080 Rosmarinic Acid C4H low borderline
Lbowcontig_40249040 Rosmarinic Acid C4H low borderline
Lbowcontig_40252870 Rosmarinic Acid C4H low borderline
Lbowcontig_40254640 Rosmarinic Acid C4H low borderline
Lbowcontig_40256060 Rosmarinic Acid C4H low borderline
Lbowcontig_50262130 Rosmarinic Acid C4H low borderline
Lbowcontig_50264580 Rosmarinic Acid C4H low borderline
Lbowcontig_50268790 Rosmarinic Acid C4H medium pass
Lbowcontig_50274110 Rosmarinic Acid C4H low borderline
Lbowcontig_50275340 Rosmarinic Acid C4H medium pass
Lbowcontig_50281860 Rosmarinic Acid C4H medium pass
Lbowcontig_50282940 Rosmarinic Acid C4H low borderline
Lbowcontig_50285340 Rosmarinic Acid C4H low borderline
Lbowcontig_60292950 Rosmarinic Acid C4H low borderline
Lbowcontig_60293180 Rosmarinic Acid C4H medium pass
Lbowcontig_60298530 Rosmarinic Acid C4H low borderline
Lbowcontig_60298590 Rosmarinic Acid C4H low borderline
Lbowcontig_60301630 Rosmarinic Acid C4H medium pass
Lbowcontig_60301650 Rosmarinic Acid C4H medium pass
Lbowcontig_60301660 Rosmarinic Acid C4H low borderline
Lbowcontig_60301670 Rosmarinic Acid C4H medium pass
Lbowcontig_60301710 Rosmarinic Acid C4H low borderline
Lbowcontig_60305120 Rosmarinic Acid C4H low borderline
Lbowcontig_60305280 Rosmarinic Acid C4H low borderline
Lbowcontig_60310790 Rosmarinic Acid C4H low borderline
Lbowcontig_60312090 Rosmarinic Acid C4H medium pass
Lbowcontig_60312110 Rosmarinic Acid C4H low borderline
Lbowcontig_60312120 Rosmarinic Acid C4H medium pass
Lbowcontig_60312630 Rosmarinic Acid C4H low borderline
Lbowcontig_60315430 Rosmarinic Acid C4H low borderline
Lbowcontig_60315720 Rosmarinic Acid C4H low borderline
Lbowcontig_60318260 Rosmarinic Acid C4H low borderline
Lbowcontig_60318960 Rosmarinic Acid C4H medium pass
Lbowcontig_60322460 Rosmarinic Acid C4H low borderline
Lbowcontig_60323570 Rosmarinic Acid C4H low borderline
Lbowcontig_80324380 Rosmarinic Acid C4H low borderline
Lbowcontig_80324850 Rosmarinic Acid C4H low borderline
Lbowcontig_80325310 Rosmarinic Acid C4H medium pass
Lbowcontig_80327660 Rosmarinic Acid C4H low borderline
Lbowcontig_80328650 Rosmarinic Acid C4H low borderline
Lbowcontig_80330810 Rosmarinic Acid C4H low borderline
Lbowcontig_80333110 Rosmarinic Acid C4H low borderline
Lbowcontig_80340760 Rosmarinic Acid C4H low borderline
Lbowcontig_80342570 Rosmarinic Acid C4H low borderline