PlantSME Plant secondary metabolism enzyme database

Leucobryum bowringii (leucobryum_bowringii)

Imported from atlas release summary for Leucobryum bowringii.

998
Candidate Protein Records
694
Pathway-Level Records
1996
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 184 10 POD (78) View species results
Terpenoid pathway 155 19 BAHD (59) View species results
Alkaloid pathway 141 17 NMT (27) View species results
Flavonoid pathway 88 10 UFGT (25) View species results
Rosmarinic acid pathway 80 7 C4H (38) View species results
Steroid pathway 46 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 878 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lbowcontig_80343330 Rosmarinic Acid C4H low borderline
Lbowcontig_80343920 Rosmarinic Acid C4H medium pass
Lbowcontig_80344110 Rosmarinic Acid C4H low borderline
Lbowcontig_80344650 Rosmarinic Acid C4H low borderline
Lbowcontig_90346530 Rosmarinic Acid C4H low borderline
Lbowcontig_90347230 Rosmarinic Acid C4H low borderline
Lbowcontig_90349770 Rosmarinic Acid C4H low borderline
Lbowcontig_90362230 Rosmarinic Acid C4H medium pass
Lbowcontig_90362250 Rosmarinic Acid C4H medium pass
Lbowcontig_90369440 Rosmarinic Acid C4H low borderline
Lbowcontig_90369520 Rosmarinic Acid C4H medium pass
Lbowcontig_90369920 Rosmarinic Acid C4H low borderline
Lbowcontig_110048390 Rosmarinic Acid CPR low borderline
Lbowcontig_30224310 Rosmarinic Acid CPR medium pass
Lbowcontig_60299900 Rosmarinic Acid CPR medium pass
Lbowcontig_60317830 Rosmarinic Acid CPR medium pass
Lbowcontig_10000830 Rosmarinic Acid HPPR low borderline
Lbowcontig_10015830 Rosmarinic Acid HPPR low borderline
Lbowcontig_160145230 Rosmarinic Acid HPPR medium pass
Lbowcontig_100022850 Rosmarinic Acid PAL high pass
Lbowcontig_100023050 Rosmarinic Acid PAL high pass
Lbowcontig_120068020 Rosmarinic Acid PAL medium pass
Lbowcontig_120068030 Rosmarinic Acid PAL medium pass
Lbowcontig_120068040 Rosmarinic Acid PAL high pass
Lbowcontig_120071810 Rosmarinic Acid PAL high pass
Lbowcontig_160129670 Rosmarinic Acid PAL high pass
Lbowcontig_200174510 Rosmarinic Acid PAL medium pass
Lbowcontig_200187550 Rosmarinic Acid PAL high pass
Lbowcontig_200199530 Rosmarinic Acid PAL high pass
Lbowcontig_200199590 Rosmarinic Acid PAL high pass
Lbowcontig_200201040 Rosmarinic Acid PAL high pass
Lbowcontig_40249320 Rosmarinic Acid PAL high pass
Lbowcontig_90359760 Rosmarinic Acid PAL high pass
Lbowcontig_90361830 Rosmarinic Acid PAL high pass
Lbowcontig_140100590 Rosmarinic Acid RAS medium pass
Lbowcontig_200174320 Rosmarinic Acid RAS medium pass
Lbowcontig_40251830 Rosmarinic Acid RAS medium pass
Lbowcontig_40257170 Rosmarinic Acid RAS low borderline
Lbowcontig_60301220 Rosmarinic Acid RAS medium pass
Lbowcontig_80324160 Rosmarinic Acid RAS medium pass
Lbowcontig_80330940 Rosmarinic Acid RAS medium pass
Lbowcontig_80332040 Rosmarinic Acid RAS medium pass
Lbowcontig_80341300 Rosmarinic Acid RAS low borderline
Lbowcontig_80341340 Rosmarinic Acid RAS low borderline
Lbowcontig_90372420 Rosmarinic Acid RAS low borderline
Lbowcontig_120074270 Rosmarinic Acid TAT medium pass
Lbowcontig_190154690 Rosmarinic Acid TAT low borderline
Lbowcontig_50284820 Rosmarinic Acid TAT medium pass
Lbowcontig_60295970 Rosmarinic Acid TAT medium pass
Lbowcontig_80341330 Rosmarinic Acid TAT low borderline