PlantSME Plant secondary metabolism enzyme database

Leucobryum bowringii (leucobryum_bowringii)

Imported from atlas release summary for Leucobryum bowringii.

998
Candidate Protein Records
694
Pathway-Level Records
1996
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 184 10 POD (78) View species results
Terpenoid pathway 155 19 BAHD (59) View species results
Alkaloid pathway 141 17 NMT (27) View species results
Flavonoid pathway 88 10 UFGT (25) View species results
Rosmarinic acid pathway 80 7 C4H (38) View species results
Steroid pathway 46 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 878 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lbowcontig_120069070 Flavonoid IFS low borderline
Lbowcontig_120069130 Flavonoid IFS medium borderline
Lbowcontig_120069180 Flavonoid IFS medium borderline
Lbowcontig_120077130 Flavonoid IFS medium borderline
Lbowcontig_120077400 Flavonoid IFS medium borderline
Lbowcontig_120080600 Flavonoid IFS medium borderline
Lbowcontig_120081500 Flavonoid IFS medium borderline
Lbowcontig_120084010 Flavonoid IFS medium borderline
Lbowcontig_120084030 Flavonoid IFS medium borderline
Lbowcontig_120084690 Flavonoid IFS medium borderline
Lbowcontig_120085020 Flavonoid IFS low borderline
Lbowcontig_120086820 Flavonoid IFS medium borderline
Lbowcontig_120087380 Flavonoid IFS low borderline
Lbowcontig_140096470 Flavonoid IFS medium borderline
Lbowcontig_150105530 Flavonoid IFS low borderline
Lbowcontig_150105550 Flavonoid IFS low borderline
Lbowcontig_160138130 Flavonoid IFS medium borderline
Lbowcontig_160138240 Flavonoid IFS medium borderline
Lbowcontig_160139000 Flavonoid IFS medium borderline
Lbowcontig_200180930 Flavonoid IFS low borderline
Lbowcontig_200182480 Flavonoid IFS low borderline
Lbowcontig_200199390 Flavonoid IFS medium borderline
Lbowcontig_220214270 Flavonoid IFS medium borderline
Lbowcontig_220217570 Flavonoid IFS medium borderline
Lbowcontig_220217750 Flavonoid IFS low borderline
Lbowcontig_220218880 Flavonoid IFS medium borderline
Lbowcontig_30221610 Flavonoid IFS low borderline
Lbowcontig_40239080 Flavonoid IFS low borderline
Lbowcontig_40242390 Flavonoid IFS medium borderline
Lbowcontig_40246080 Flavonoid IFS low borderline
Lbowcontig_40250380 Flavonoid IFS low borderline
Lbowcontig_40256060 Flavonoid IFS low borderline
Lbowcontig_50268790 Flavonoid IFS medium borderline
Lbowcontig_50274110 Flavonoid IFS medium borderline
Lbowcontig_50277590 Flavonoid IFS low borderline
Lbowcontig_50282940 Flavonoid IFS low borderline
Lbowcontig_50285340 Flavonoid IFS low borderline
Lbowcontig_60301630 Flavonoid IFS medium borderline
Lbowcontig_60301650 Flavonoid IFS medium borderline
Lbowcontig_60301670 Flavonoid IFS medium borderline
Lbowcontig_60301710 Flavonoid IFS medium borderline
Lbowcontig_60312120 Flavonoid IFS medium borderline
Lbowcontig_60312630 Flavonoid IFS medium borderline
Lbowcontig_60315430 Flavonoid IFS low borderline
Lbowcontig_60316560 Flavonoid IFS low borderline
Lbowcontig_60319770 Flavonoid IFS medium borderline
Lbowcontig_60322460 Flavonoid IFS low borderline
Lbowcontig_60323570 Flavonoid IFS low borderline
Lbowcontig_80324380 Flavonoid IFS medium borderline
Lbowcontig_80325890 Flavonoid IFS low borderline