PlantSME Plant secondary metabolism enzyme database

Litchi chinensis (litchi_chinensis)

Imported from atlas release summary for Litchi chinensis.

1897
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 553 19 UGT (236) View species results
Alkaloid pathway 440 23 7DLGT (124) View species results
Phenylpropanoid pathway 336 11 POD (118) View species results
Flavonoid pathway 308 13 UFGT (212) View species results
Steroid pathway 142 11 CAS (67) View species results
Rosmarinic acid pathway 118 7 C4H (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1567 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 263 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
litchi_chinensis_LITCHI001721.m1 Steroid CYP90D1 low borderline
litchi_chinensis_LITCHI002156.m1 Steroid CYP90D1 low borderline
litchi_chinensis_LITCHI005358.m1 Steroid CYP90D1 low borderline
litchi_chinensis_LITCHI006644.m1 Steroid CYP90D1 medium borderline
litchi_chinensis_LITCHI009949.m1 Steroid CYP90D1 low borderline
litchi_chinensis_LITCHI010160.m1 Steroid CYP90D1 low borderline
litchi_chinensis_LITCHI010164.m1 Steroid CYP90D1 low borderline
litchi_chinensis_LITCHI010892.m1 Steroid CYP90D1 low borderline
litchi_chinensis_LITCHI010894.m1 Steroid CYP90D1 low borderline
litchi_chinensis_LITCHI010989.m1 Steroid CYP90D1 medium borderline
litchi_chinensis_LITCHI012014.m1 Steroid CYP90D1 low borderline
litchi_chinensis_LITCHI013086.m1 Steroid CYP90D1 low borderline
litchi_chinensis_LITCHI016179.m1 Steroid CYP90D1 low borderline
litchi_chinensis_LITCHI019197.m1 Steroid CYP90D1 medium borderline
litchi_chinensis_LITCHI019478.m1 Steroid CYP90D1 medium borderline
litchi_chinensis_LITCHI020639.m1 Steroid CYP90D1 medium borderline
litchi_chinensis_LITCHI022217.m1 Steroid CYP90D1 medium borderline
litchi_chinensis_LITCHI022513.m1 Steroid CYP90D1 low borderline
litchi_chinensis_LITCHI022907.m1 Steroid CYP90D1 low borderline
litchi_chinensis_LITCHI022910.m1 Steroid CYP90D1 low borderline
litchi_chinensis_LITCHI025228.m1 Steroid CYP90D1 medium borderline
litchi_chinensis_LITCHI025235.m1 Steroid CYP90D1 medium borderline
litchi_chinensis_LITCHI025316.m1 Steroid CYP90D1 low borderline
litchi_chinensis_LITCHI025638.m1 Steroid CYP90D1 medium borderline
litchi_chinensis_LITCHI027343.m1 Steroid CYP90D1 medium borderline
litchi_chinensis_LITCHI027539.m1 Steroid CYP90D1 low borderline
litchi_chinensis_LITCHI027594.m1 Steroid CYP90D1 medium borderline
litchi_chinensis_LITCHI028278.m1 Steroid CYP90D1 medium borderline
litchi_chinensis_LITCHI028690.m1 Steroid CYP90D1 low borderline
litchi_chinensis_LITCHI030056.m1 Steroid CYP90D1 medium borderline
litchi_chinensis_LITCHI030924.m1 Steroid CYP90D1 low borderline
litchi_chinensis_LITCHI031005.m1 Steroid CYP90D1 low borderline
litchi_chinensis_LITCHI031441.m1 Steroid CYP90D1 medium borderline
litchi_chinensis_LITCHI031445.m1 Steroid CYP90D1 medium borderline
litchi_chinensis_LITCHI031449.m1 Steroid CYP90D1 medium borderline