PlantSME Plant secondary metabolism enzyme database

Litchi chinensis (litchi_chinensis)

Imported from atlas release summary for Litchi chinensis.

1897
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 553 19 UGT (236) View species results
Alkaloid pathway 440 23 7DLGT (124) View species results
Phenylpropanoid pathway 336 11 POD (118) View species results
Flavonoid pathway 308 13 UFGT (212) View species results
Steroid pathway 142 11 CAS (67) View species results
Rosmarinic acid pathway 118 7 C4H (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1567 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 263 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TAT
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Gene Pathway Family Confidence Status Best Target
litchi_chinensis_LITCHI000599.m1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
litchi_chinensis_LITCHI001225.m1 Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
litchi_chinensis_LITCHI001342.m1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
litchi_chinensis_LITCHI001856.m1 Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
litchi_chinensis_LITCHI001861.m1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
litchi_chinensis_LITCHI001867.m1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
litchi_chinensis_LITCHI004069.m1 Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
litchi_chinensis_LITCHI004757.m1 Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
litchi_chinensis_LITCHI009968.m1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
litchi_chinensis_LITCHI009971.m1 Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
litchi_chinensis_LITCHI013063.m1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
litchi_chinensis_LITCHI017078.m1 Rosmarinic Acid TAT medium pass TAT__00002__sp_Q9C969_ISS1_ARATH
litchi_chinensis_LITCHI018251.m1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
litchi_chinensis_LITCHI020064.m1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
litchi_chinensis_LITCHI021006.m1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
litchi_chinensis_LITCHI021008.m1 Rosmarinic Acid TAT low borderline TAT__00003__sp_Q9LVY1_TAT_ARATH
litchi_chinensis_LITCHI023688.m1 Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
litchi_chinensis_LITCHI023690.m1 Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
litchi_chinensis_LITCHI027526.m1 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
litchi_chinensis_LITCHI030740.m1 Rosmarinic Acid TAT medium pass TAT__00002__sp_Q9C969_ISS1_ARATH