PlantSME Plant secondary metabolism enzyme database

Litchi chinensis (litchi_chinensis)

Imported from atlas release summary for Litchi chinensis.

1897
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 553 19 UGT (236) View species results
Alkaloid pathway 440 23 7DLGT (124) View species results
Phenylpropanoid pathway 336 11 POD (118) View species results
Flavonoid pathway 308 13 UFGT (212) View species results
Steroid pathway 142 11 CAS (67) View species results
Rosmarinic acid pathway 118 7 C4H (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1567 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 263 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
litchi_chinensis_LITCHI001824.m1 Alkaloid PYKS low borderline
litchi_chinensis_LITCHI001957.m1 Alkaloid PYKS high pass
litchi_chinensis_LITCHI002805.m1 Alkaloid PYKS high pass
litchi_chinensis_LITCHI004247.m1 Alkaloid PYKS low borderline
litchi_chinensis_LITCHI005522.m1 Alkaloid PYKS low borderline
litchi_chinensis_LITCHI009221.m1 Alkaloid PYKS low borderline
litchi_chinensis_LITCHI009530.m1 Alkaloid PYKS medium pass
litchi_chinensis_LITCHI009531.m1 Alkaloid PYKS medium pass
litchi_chinensis_LITCHI010286.m1 Alkaloid PYKS low borderline
litchi_chinensis_LITCHI011201.m1 Alkaloid PYKS high pass
litchi_chinensis_LITCHI014475.m1 Alkaloid PYKS low borderline
litchi_chinensis_LITCHI014914.m1 Alkaloid PYKS low borderline
litchi_chinensis_LITCHI014915.m1 Alkaloid PYKS low borderline
litchi_chinensis_LITCHI014916.m1 Alkaloid PYKS low borderline
litchi_chinensis_LITCHI014917.m1 Alkaloid PYKS low borderline
litchi_chinensis_LITCHI015106.m1 Alkaloid PYKS high pass
litchi_chinensis_LITCHI015107.m1 Alkaloid PYKS medium pass
litchi_chinensis_LITCHI015108.m1 Alkaloid PYKS high pass
litchi_chinensis_LITCHI015110.m1 Alkaloid PYKS high pass
litchi_chinensis_LITCHI016531.m1 Alkaloid PYKS low borderline
litchi_chinensis_LITCHI016536.m1 Alkaloid PYKS low borderline
litchi_chinensis_LITCHI017050.m1 Alkaloid PYKS low borderline
litchi_chinensis_LITCHI017426.m1 Alkaloid PYKS low borderline
litchi_chinensis_LITCHI020852.m1 Alkaloid PYKS high pass
litchi_chinensis_LITCHI022821.m1 Alkaloid PYKS low borderline
litchi_chinensis_LITCHI023319.m1 Alkaloid PYKS high pass
litchi_chinensis_LITCHI023320.m1 Alkaloid PYKS high pass
litchi_chinensis_LITCHI023321.m1 Alkaloid PYKS medium pass
litchi_chinensis_LITCHI023322.m1 Alkaloid PYKS medium pass
litchi_chinensis_LITCHI024820.m1 Alkaloid PYKS low borderline
litchi_chinensis_LITCHI025403.m1 Alkaloid PYKS high pass
litchi_chinensis_LITCHI026802.m1 Alkaloid PYKS low borderline
litchi_chinensis_LITCHI027967.m1 Alkaloid PYKS low borderline
litchi_chinensis_LITCHI027970.m1 Alkaloid PYKS low borderline