PlantSME Plant secondary metabolism enzyme database

Litchi chinensis (litchi_chinensis)

Imported from atlas release summary for Litchi chinensis.

1897
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 553 19 UGT (236) View species results
Alkaloid pathway 440 23 7DLGT (124) View species results
Phenylpropanoid pathway 336 11 POD (118) View species results
Flavonoid pathway 308 13 UFGT (212) View species results
Steroid pathway 142 11 CAS (67) View species results
Rosmarinic acid pathway 118 7 C4H (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1567 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 263 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
litchi_chinensis_LITCHI001530.m1 Alkaloid GS high pass
litchi_chinensis_LITCHI001532.m1 Alkaloid GS high pass
litchi_chinensis_LITCHI004945.m1 Alkaloid GS low borderline
litchi_chinensis_LITCHI006948.m1 Alkaloid GS high pass
litchi_chinensis_LITCHI006950.m1 Alkaloid GS low borderline
litchi_chinensis_LITCHI006952.m1 Alkaloid GS low borderline
litchi_chinensis_LITCHI006953.m1 Alkaloid GS low borderline
litchi_chinensis_LITCHI007148.m1 Alkaloid GS low borderline
litchi_chinensis_LITCHI007192.m1 Alkaloid GS high pass
litchi_chinensis_LITCHI007193.m1 Alkaloid GS high pass
litchi_chinensis_LITCHI007194.m1 Alkaloid GS high pass
litchi_chinensis_LITCHI007195.m1 Alkaloid GS high pass
litchi_chinensis_LITCHI007374.m1 Alkaloid GS medium pass
litchi_chinensis_LITCHI007649.m1 Alkaloid GS medium pass
litchi_chinensis_LITCHI007653.m1 Alkaloid GS high pass
litchi_chinensis_LITCHI007654.m1 Alkaloid GS high pass
litchi_chinensis_LITCHI009036.m1 Alkaloid GS low borderline
litchi_chinensis_LITCHI009037.m1 Alkaloid GS low borderline
litchi_chinensis_LITCHI009038.m1 Alkaloid GS low borderline
litchi_chinensis_LITCHI009050.m1 Alkaloid GS low borderline
litchi_chinensis_LITCHI009264.m1 Alkaloid GS medium pass
litchi_chinensis_LITCHI009266.m1 Alkaloid GS medium pass
litchi_chinensis_LITCHI010078.m1 Alkaloid GS high pass
litchi_chinensis_LITCHI013049.m1 Alkaloid GS low borderline
litchi_chinensis_LITCHI015120.m1 Alkaloid GS medium pass
litchi_chinensis_LITCHI015121.m1 Alkaloid GS medium pass
litchi_chinensis_LITCHI020006.m1 Alkaloid GS high pass
litchi_chinensis_LITCHI020010.m1 Alkaloid GS high pass
litchi_chinensis_LITCHI024780.m1 Alkaloid GS low borderline
litchi_chinensis_LITCHI025577.m1 Alkaloid GS low borderline
litchi_chinensis_LITCHI026964.m1 Alkaloid GS low borderline
litchi_chinensis_LITCHI027220.m1 Alkaloid GS high pass
litchi_chinensis_LITCHI027563.m1 Alkaloid GS low borderline
litchi_chinensis_LITCHI028669.m1 Alkaloid GS high pass
litchi_chinensis_LITCHI028670.m1 Alkaloid GS high pass
litchi_chinensis_LITCHI029277.m1 Alkaloid GS low borderline
litchi_chinensis_LITCHI031206.m1 Alkaloid GS low borderline