PlantSME Plant secondary metabolism enzyme database

Litchi chinensis (litchi_chinensis)

Imported from atlas release summary for Litchi chinensis.

1897
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 553 19 UGT (236) View species results
Alkaloid pathway 440 23 7DLGT (124) View species results
Phenylpropanoid pathway 336 11 POD (118) View species results
Flavonoid pathway 308 13 UFGT (212) View species results
Steroid pathway 142 11 CAS (67) View species results
Rosmarinic acid pathway 118 7 C4H (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1567 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 263 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
litchi_chinensis_LITCHI000929.m1 Alkaloid IO low borderline
litchi_chinensis_LITCHI000964.m1 Alkaloid IO low borderline
litchi_chinensis_LITCHI003013.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI003040.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI003042.m1 Alkaloid IO high pass
litchi_chinensis_LITCHI004816.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI006355.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI006751.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI006960.m1 Alkaloid IO low borderline
litchi_chinensis_LITCHI007760.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI007777.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI007816.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI007818.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI007822.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI008044.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI008045.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI009146.m1 Alkaloid IO low borderline
litchi_chinensis_LITCHI010164.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI010887.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI012014.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI013744.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI016582.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI017911.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI018763.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI018764.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI018765.m1 Alkaloid IO medium pass
litchi_chinensis_LITCHI018766.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI020600.m1 Alkaloid IO low borderline
litchi_chinensis_LITCHI021710.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI021716.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI021838.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI021840.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI022849.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI022964.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI023735.m1 Alkaloid IO medium borderline
litchi_chinensis_LITCHI025637.m1 Alkaloid IO low borderline
litchi_chinensis_LITCHI029571.m1 Alkaloid IO low borderline
litchi_chinensis_LITCHI031066.m1 Alkaloid IO low borderline