PlantSME Plant secondary metabolism enzyme database

Panax ginseng (panax_ginseng)

Imported from atlas release summary for Panax ginseng.

2784
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 874 20 BAHD (314) View species results
Alkaloid pathway 578 21 7DLGT (117) View species results
Phenylpropanoid pathway 553 13 POD (226) View species results
Flavonoid pathway 343 12 UFGT (219) View species results
Rosmarinic acid pathway 254 7 C4H (95) View species results
Steroid pathway 182 12 CAS (87) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2508 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 556 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Gene Pathway Family Confidence Status
Pg_S5385.6 Alkaloid 7DLGT medium pass
Pg_S5398.14 Alkaloid 7DLGT medium pass
Pg_S5520.6 Alkaloid 7DLGT low borderline
Pg_S5520.7 Alkaloid 7DLGT low borderline
Pg_S5520.8 Alkaloid 7DLGT medium pass
Pg_S5520.9 Alkaloid 7DLGT medium pass
Pg_S5521.1 Alkaloid 7DLGT low borderline
Pg_S5540.4 Alkaloid 7DLGT low borderline
Pg_S5576.8 Alkaloid 7DLGT low borderline
Pg_S5599.4 Alkaloid 7DLGT low borderline
Pg_S5615.4 Alkaloid 7DLGT low borderline
Pg_S5686.1 Alkaloid 7DLGT high pass
Pg_S5731.10 Alkaloid 7DLGT medium pass
Pg_S5731.12 Alkaloid 7DLGT medium pass
Pg_S5731.9 Alkaloid 7DLGT low borderline
Pg_S5840.11 Alkaloid 7DLGT low borderline
Pg_S5840.12 Alkaloid 7DLGT low borderline
Pg_S5860.1 Alkaloid 7DLGT low borderline
Pg_S5890.3 Alkaloid 7DLGT low borderline
Pg_S5935.6 Alkaloid 7DLGT medium pass
Pg_S5935.7 Alkaloid 7DLGT medium pass
Pg_S5935.8 Alkaloid 7DLGT low borderline
Pg_S5935.9 Alkaloid 7DLGT medium pass
Pg_S5977.4 Alkaloid 7DLGT low borderline
Pg_S5977.5 Alkaloid 7DLGT medium pass
Pg_S5977.6 Alkaloid 7DLGT medium pass
Pg_S6027.2 Alkaloid 7DLGT low borderline
Pg_S6256.3 Alkaloid 7DLGT low borderline
Pg_S6259.3 Alkaloid 7DLGT low borderline
Pg_S6337.1 Alkaloid 7DLGT low borderline
Pg_S6337.5 Alkaloid 7DLGT low borderline
Pg_S6441.11 Alkaloid 7DLGT low borderline
Pg_S6463.4 Alkaloid 7DLGT low borderline
Pg_S6575.3 Alkaloid 7DLGT low borderline
Pg_S6578.1 Alkaloid 7DLGT medium pass
Pg_S6621.3 Alkaloid 7DLGT low borderline
Pg_S6708.2 Alkaloid 7DLGT low borderline
Pg_S6708.3 Alkaloid 7DLGT low borderline
Pg_S6708.5 Alkaloid 7DLGT low borderline
Pg_S6715.2 Alkaloid 7DLGT medium pass
Pg_S6788.2 Alkaloid 7DLGT low borderline
Pg_S7152.6 Alkaloid 7DLGT low borderline
Pg_S7225.1 Alkaloid 7DLGT low borderline
Pg_S7260.1 Alkaloid 7DLGT low borderline
Pg_S7638.1 Alkaloid 7DLGT low borderline
Pg_S8137.3 Alkaloid 7DLGT low borderline
Pg_S8150.2 Alkaloid 7DLGT low borderline
Pg_S8654.2 Alkaloid 7DLGT medium pass
Pg_S8654.4 Alkaloid 7DLGT low borderline
Pg_S8923.1 Alkaloid 7DLGT low borderline