PlantSME Plant secondary metabolism enzyme database

Panax ginseng (panax_ginseng)

Imported from atlas release summary for Panax ginseng.

2784
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 874 20 BAHD (314) View species results
Alkaloid pathway 578 21 7DLGT (117) View species results
Phenylpropanoid pathway 553 13 POD (226) View species results
Flavonoid pathway 343 12 UFGT (219) View species results
Rosmarinic acid pathway 254 7 C4H (95) View species results
Steroid pathway 182 12 CAS (87) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2508 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 556 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Gene Pathway Family Confidence Status Best Target
Pg_S2404.3 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pg_S2442.4 Phenylpropanoid CAD low borderline CAD__00014__sp_Q2KNL5_CADH1_OCIBA
Pg_S2442.5 Phenylpropanoid CAD low borderline CAD__00015__sp_Q6ZHS4_CADH2_ORYSJ
Pg_S2552.4 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pg_S2623.12 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pg_S2779.1 Phenylpropanoid CAD medium pass CAD__00004__sp_B5LAT8_CAD1_CAPAN
Pg_S2779.2 Phenylpropanoid CAD low borderline CAD__00014__sp_Q2KNL5_CADH1_OCIBA
Pg_S2779.3 Phenylpropanoid CAD low borderline CAD__00004__sp_B5LAT8_CAD1_CAPAN
Pg_S2891.13 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pg_S2946.24 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pg_S3083.27 Phenylpropanoid CAD medium pass CAD__00014__sp_Q2KNL5_CADH1_OCIBA
Pg_S3500.4 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Pg_S3649.8 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pg_S3673.5 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pg_S3673.6 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pg_S3777.12 Phenylpropanoid CAD low borderline CAD__00012__sp_Q02972_CADH8_ARATH
Pg_S4012.6 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pg_S4181.13 Phenylpropanoid CAD low borderline CAD__00014__sp_Q2KNL5_CADH1_OCIBA
Pg_S4321.18 Phenylpropanoid CAD medium pass CAD__00014__sp_Q2KNL5_CADH1_OCIBA
Pg_S4412.14 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pg_S4484.21 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pg_S4501.1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Pg_S4501.2 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Pg_S4590.19 Phenylpropanoid CAD low borderline CAD__00004__sp_B5LAT8_CAD1_CAPAN
Pg_S4595.1 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pg_S4595.3 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pg_S4596.6 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pg_S4696.8 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Pg_S4696.9 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Pg_S5092.3 Phenylpropanoid CAD low borderline CAD__00012__sp_Q02972_CADH8_ARATH
Pg_S5540.6 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pg_S5643.5 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pg_S5687.4 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pg_S5747.14 Phenylpropanoid CAD medium pass CAD__00008__sp_O49482_CADH5_ARATH
Pg_S5908.12 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Pg_S6039.3 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Pg_S6548.3 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pg_S6548.4 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pg_S6577.4 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Pg_S6603.3 Phenylpropanoid CAD low borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Pg_S7717.7 Phenylpropanoid CAD medium pass CAD__00008__sp_O49482_CADH5_ARATH
Pg_S7812.2 Phenylpropanoid CAD low borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Pg_S7985.1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pg_S8690.1 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM