PlantSME Plant secondary metabolism enzyme database

Panax ginseng (panax_ginseng)

Imported from atlas release summary for Panax ginseng.

2784
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 874 20 BAHD (314) View species results
Alkaloid pathway 578 21 7DLGT (117) View species results
Phenylpropanoid pathway 553 13 POD (226) View species results
Flavonoid pathway 343 12 UFGT (219) View species results
Rosmarinic acid pathway 254 7 C4H (95) View species results
Steroid pathway 182 12 CAS (87) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2508 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 556 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
Pg_S1425.1 Steroid DWF4/CYP90B1 medium borderline
Pg_S1497.20 Steroid DWF4/CYP90B1 low borderline
Pg_S1511.1 Steroid DWF4/CYP90B1 low borderline
Pg_S1526.1 Steroid DWF4/CYP90B1 medium borderline
Pg_S1552.26 Steroid DWF4/CYP90B1 low borderline
Pg_S1552.27 Steroid DWF4/CYP90B1 low borderline
Pg_S1561.3 Steroid DWF4/CYP90B1 low borderline
Pg_S1561.9 Steroid DWF4/CYP90B1 low borderline
Pg_S1616.7 Steroid DWF4/CYP90B1 low borderline
Pg_S1721.4 Steroid DWF4/CYP90B1 low borderline
Pg_S1721.5 Steroid DWF4/CYP90B1 low borderline
Pg_S1752.1 Steroid DWF4/CYP90B1 medium borderline
Pg_S1770.12 Steroid DWF4/CYP90B1 medium borderline
Pg_S1812.26 Steroid DWF4/CYP90B1 low borderline
Pg_S1862.15 Steroid DWF4/CYP90B1 low borderline
Pg_S1948.1 Steroid DWF4/CYP90B1 low borderline
Pg_S1952.5 Steroid DWF4/CYP90B1 low borderline
Pg_S1956.12 Steroid DWF4/CYP90B1 medium borderline
Pg_S1960.16 Steroid DWF4/CYP90B1 low borderline
Pg_S1972.1 Steroid DWF4/CYP90B1 low borderline
Pg_S1989.3 Steroid DWF4/CYP90B1 low borderline
Pg_S2055.2 Steroid DWF4/CYP90B1 medium borderline
Pg_S2058.1 Steroid DWF4/CYP90B1 low borderline
Pg_S2187.3 Steroid DWF4/CYP90B1 low borderline
Pg_S2275.3 Steroid DWF4/CYP90B1 low borderline
Pg_S2295.13 Steroid DWF4/CYP90B1 medium borderline
Pg_S2307.11 Steroid DWF4/CYP90B1 medium borderline
Pg_S2518.3 Steroid DWF4/CYP90B1 low borderline
Pg_S2522.5 Steroid DWF4/CYP90B1 low borderline
Pg_S2523.1 Steroid DWF4/CYP90B1 low borderline
Pg_S2538.3 Steroid DWF4/CYP90B1 low borderline
Pg_S2538.6 Steroid DWF4/CYP90B1 low borderline
Pg_S2640.1 Steroid DWF4/CYP90B1 low borderline
Pg_S2748.15 Steroid DWF4/CYP90B1 low borderline
Pg_S2763.1 Steroid DWF4/CYP90B1 low borderline
Pg_S2829.1 Steroid DWF4/CYP90B1 low borderline
Pg_S2878.1 Steroid DWF4/CYP90B1 low borderline
Pg_S2885.5 Steroid DWF4/CYP90B1 medium borderline
Pg_S2898.9 Steroid DWF4/CYP90B1 low borderline
Pg_S2923.11 Steroid DWF4/CYP90B1 medium borderline
Pg_S2967.5 Steroid DWF4/CYP90B1 low borderline
Pg_S2991.9 Steroid DWF4/CYP90B1 low borderline
Pg_S2992.5 Steroid DWF4/CYP90B1 low borderline
Pg_S3039.8 Steroid DWF4/CYP90B1 medium borderline
Pg_S3318.1 Steroid DWF4/CYP90B1 low borderline
Pg_S3341.7 Steroid DWF4/CYP90B1 low borderline
Pg_S3431.11 Steroid DWF4/CYP90B1 low borderline
Pg_S3468.8 Steroid DWF4/CYP90B1 low borderline
Pg_S3488.13 Steroid DWF4/CYP90B1 medium borderline
Pg_S3500.26 Steroid DWF4/CYP90B1 low borderline