PlantSME Plant secondary metabolism enzyme database

Panax ginseng (panax_ginseng)

Imported from atlas release summary for Panax ginseng.

2784
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 874 20 BAHD (314) View species results
Alkaloid pathway 578 21 7DLGT (117) View species results
Phenylpropanoid pathway 553 13 POD (226) View species results
Flavonoid pathway 343 12 UFGT (219) View species results
Rosmarinic acid pathway 254 7 C4H (95) View species results
Steroid pathway 182 12 CAS (87) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2508 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 556 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
Pg_S0057.21 Alkaloid GS high pass
Pg_S0102.42 Alkaloid GS low borderline
Pg_S0108.19 Alkaloid GS low borderline
Pg_S0219.10 Alkaloid GS low borderline
Pg_S0280.54 Alkaloid GS low borderline
Pg_S0358.22 Alkaloid GS high pass
Pg_S0367.20 Alkaloid GS low borderline
Pg_S0450.27 Alkaloid GS medium pass
Pg_S0516.37 Alkaloid GS medium pass
Pg_S0516.38 Alkaloid GS medium pass
Pg_S0588.23 Alkaloid GS low borderline
Pg_S0710.12 Alkaloid GS low borderline
Pg_S0710.13 Alkaloid GS low borderline
Pg_S0710.14 Alkaloid GS low borderline
Pg_S0872.8 Alkaloid GS high pass
Pg_S1029.17 Alkaloid GS low borderline
Pg_S1034.37 Alkaloid GS medium pass
Pg_S1034.38 Alkaloid GS medium pass
Pg_S1106.64 Alkaloid GS high pass
Pg_S1240.32 Alkaloid GS high pass
Pg_S1621.6 Alkaloid GS medium pass
Pg_S1697.2 Alkaloid GS high pass
Pg_S1797.10 Alkaloid GS medium pass
Pg_S1797.9 Alkaloid GS medium pass
Pg_S1799.1 Alkaloid GS low borderline
Pg_S1888.2 Alkaloid GS low borderline
Pg_S1888.4 Alkaloid GS medium pass
Pg_S2036.7 Alkaloid GS high pass
Pg_S2176.4 Alkaloid GS high pass
Pg_S2442.4 Alkaloid GS low borderline
Pg_S2442.5 Alkaloid GS low borderline
Pg_S2779.1 Alkaloid GS low borderline
Pg_S2779.2 Alkaloid GS low borderline
Pg_S2779.3 Alkaloid GS low borderline
Pg_S2811.8 Alkaloid GS medium pass
Pg_S3083.27 Alkaloid GS high pass
Pg_S3098.12 Alkaloid GS low borderline
Pg_S3500.25 Alkaloid GS low borderline
Pg_S4181.13 Alkaloid GS low borderline
Pg_S4181.6 Alkaloid GS low borderline
Pg_S4321.18 Alkaloid GS low borderline
Pg_S4590.19 Alkaloid GS low borderline
Pg_S4594.2 Alkaloid GS medium pass
Pg_S4696.8 Alkaloid GS high pass
Pg_S4696.9 Alkaloid GS high pass
Pg_S4922.5 Alkaloid GS low borderline
Pg_S5214.1 Alkaloid GS low borderline
Pg_S5747.14 Alkaloid GS low borderline
Pg_S5965.1 Alkaloid GS low borderline
Pg_S6112.8 Alkaloid GS low borderline