PlantSME Plant secondary metabolism enzyme database

Panax ginseng (panax_ginseng)

Imported from atlas release summary for Panax ginseng.

2784
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 874 20 BAHD (314) View species results
Alkaloid pathway 578 21 7DLGT (117) View species results
Phenylpropanoid pathway 553 13 POD (226) View species results
Flavonoid pathway 343 12 UFGT (219) View species results
Rosmarinic acid pathway 254 7 C4H (95) View species results
Steroid pathway 182 12 CAS (87) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2508 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 556 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
Pg_S0129.26 Alkaloid H6H low borderline
Pg_S0213.71 Alkaloid H6H low borderline
Pg_S0213.90 Alkaloid H6H low borderline
Pg_S0234.17 Alkaloid H6H medium borderline
Pg_S0244.62 Alkaloid H6H medium borderline
Pg_S0260.2 Alkaloid H6H low borderline
Pg_S0403.11 Alkaloid H6H medium pass
Pg_S0589.3 Alkaloid H6H low borderline
Pg_S0660.1 Alkaloid H6H low borderline
Pg_S0693.17 Alkaloid H6H medium borderline
Pg_S0727.17 Alkaloid H6H medium borderline
Pg_S0804.45 Alkaloid H6H medium borderline
Pg_S0888.23 Alkaloid H6H high pass
Pg_S0908.15 Alkaloid H6H medium pass
Pg_S0949.2 Alkaloid H6H low borderline
Pg_S0988.1 Alkaloid H6H low borderline
Pg_S0988.2 Alkaloid H6H low borderline
Pg_S1223.12 Alkaloid H6H low borderline
Pg_S1257.1 Alkaloid H6H low borderline
Pg_S1257.2 Alkaloid H6H low borderline
Pg_S1295.22 Alkaloid H6H low borderline
Pg_S1323.1 Alkaloid H6H medium borderline
Pg_S1358.7 Alkaloid H6H low borderline
Pg_S1383.3 Alkaloid H6H low borderline
Pg_S1507.28 Alkaloid H6H low borderline
Pg_S1518.44 Alkaloid H6H low borderline
Pg_S1647.31 Alkaloid H6H medium borderline
Pg_S1753.5 Alkaloid H6H low borderline
Pg_S1761.10 Alkaloid H6H low borderline
Pg_S1881.5 Alkaloid H6H low borderline
Pg_S2045.3 Alkaloid H6H low borderline
Pg_S2139.4 Alkaloid H6H low borderline
Pg_S2242.7 Alkaloid H6H medium borderline
Pg_S2618.4 Alkaloid H6H medium borderline
Pg_S2848.14 Alkaloid H6H medium borderline
Pg_S2848.15 Alkaloid H6H high pass
Pg_S2871.14 Alkaloid H6H low borderline
Pg_S2902.10 Alkaloid H6H low borderline
Pg_S2950.1 Alkaloid H6H low borderline
Pg_S3012.4 Alkaloid H6H medium pass
Pg_S3012.5 Alkaloid H6H low borderline
Pg_S3033.2 Alkaloid H6H low borderline
Pg_S3178.14 Alkaloid H6H low borderline
Pg_S3249.2 Alkaloid H6H medium borderline
Pg_S3432.6 Alkaloid H6H medium borderline
Pg_S3517.2 Alkaloid H6H low borderline
Pg_S3825.5 Alkaloid H6H low borderline
Pg_S3856.8 Alkaloid H6H low borderline
Pg_S3958.3 Alkaloid H6H low borderline
Pg_S4055.1 Alkaloid H6H medium borderline