PlantSME Plant secondary metabolism enzyme database

Panax ginseng (panax_ginseng)

Imported from atlas release summary for Panax ginseng.

2784
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 874 20 BAHD (314) View species results
Alkaloid pathway 578 21 7DLGT (117) View species results
Phenylpropanoid pathway 553 13 POD (226) View species results
Flavonoid pathway 343 12 UFGT (219) View species results
Rosmarinic acid pathway 254 7 C4H (95) View species results
Steroid pathway 182 12 CAS (87) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2508 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 556 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status Best Target
Pg_S0024.2 Flavonoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
Pg_S0085.45 Flavonoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
Pg_S0247.35 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pg_S0247.36 Flavonoid PAL medium pass PAL__00002__sp_P35510_PAL1_ARATH
Pg_S0406.8 Flavonoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
Pg_S0428.19 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pg_S0428.47 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pg_S0528.1 Flavonoid PAL low borderline PAL__00009__sp_Q9SS45_PAL4_ARATH
Pg_S0954.1 Flavonoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
Pg_S1135.17 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pg_S1157.28 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pg_S1239.2 Flavonoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
Pg_S1562.11 Flavonoid PAL low borderline PAL__00009__sp_Q9SS45_PAL4_ARATH
Pg_S1960.32 Flavonoid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Pg_S1960.33 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pg_S2256.14 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pg_S2940.7 Flavonoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
Pg_S3606.18 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pg_S4658.16 Flavonoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
Pg_S4658.17 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pg_S6037.3 Flavonoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
Pg_S0024.2 Phenylpropanoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
Pg_S0085.45 Phenylpropanoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
Pg_S0247.35 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pg_S0247.36 Phenylpropanoid PAL medium pass PAL__00002__sp_P35510_PAL1_ARATH
Pg_S0406.8 Phenylpropanoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
Pg_S0428.19 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pg_S0428.47 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pg_S0528.1 Phenylpropanoid PAL low borderline PAL__00009__sp_Q9SS45_PAL4_ARATH
Pg_S0954.1 Phenylpropanoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
Pg_S1135.17 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pg_S1157.28 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pg_S1239.2 Phenylpropanoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
Pg_S1562.11 Phenylpropanoid PAL low borderline PAL__00009__sp_Q9SS45_PAL4_ARATH
Pg_S1960.32 Phenylpropanoid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Pg_S1960.33 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pg_S2256.14 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pg_S2940.7 Phenylpropanoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
Pg_S3606.18 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pg_S4658.16 Phenylpropanoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
Pg_S4658.17 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pg_S6037.3 Phenylpropanoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
Pg_S0024.2 Rosmarinic Acid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
Pg_S0085.45 Rosmarinic Acid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
Pg_S0247.35 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pg_S0247.36 Rosmarinic Acid PAL medium pass PAL__00002__sp_P35510_PAL1_ARATH
Pg_S0406.8 Rosmarinic Acid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
Pg_S0428.19 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pg_S0428.47 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pg_S0528.1 Rosmarinic Acid PAL low borderline PAL__00009__sp_Q9SS45_PAL4_ARATH