PlantSME Plant secondary metabolism enzyme database

Panax ginseng (panax_ginseng)

Imported from atlas release summary for Panax ginseng.

2784
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 874 20 BAHD (314) View species results
Alkaloid pathway 578 21 7DLGT (117) View species results
Phenylpropanoid pathway 553 13 POD (226) View species results
Flavonoid pathway 343 12 UFGT (219) View species results
Rosmarinic acid pathway 254 7 C4H (95) View species results
Steroid pathway 182 12 CAS (87) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2508 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 556 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
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Gene Pathway Family Confidence Status Best Target
Pg_S4463.3 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
Pg_S4504.8 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Pg_S4561.2 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Pg_S4709.2 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
Pg_S4769.4 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Pg_S4813.3 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Pg_S4892.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Pg_S4930.6 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Pg_S5402.12 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Pg_S5555.3 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Pg_S5606.1 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
Pg_S5613.4 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Pg_S5950.4 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
Pg_S5978.4 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
Pg_S6195.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Pg_S6609.7 Alkaloid STR low borderline STR__00003__sp_Q9M1B4_SSL13_ARATH
Pg_S6725.4 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
Pg_S6725.5 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Pg_S6774.1 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
Pg_S6806.3 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Pg_S6811.4 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Pg_S7083.2 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Pg_S7440.4 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Pg_S7901.2 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Pg_S8635.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Pg_S8684.2 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
Pg_S8731.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR