PlantSME Plant secondary metabolism enzyme database

Panax ginseng (panax_ginseng)

Imported from atlas release summary for Panax ginseng.

2784
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 874 20 BAHD (314) View species results
Alkaloid pathway 578 21 7DLGT (117) View species results
Phenylpropanoid pathway 553 13 POD (226) View species results
Flavonoid pathway 343 12 UFGT (219) View species results
Rosmarinic acid pathway 254 7 C4H (95) View species results
Steroid pathway 182 12 CAS (87) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2508 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 556 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
Pg_S4651.1 Terpenoid TPS medium pass TPS__00008__sp_A0A167V661_TPS8_CAMSI
Pg_S5540.5 Terpenoid TPS medium pass TPS__00136__sp_J9R5V4_TPS2_VALOF
Pg_S5540.6 Terpenoid TPS medium pass TPS__00136__sp_J9R5V4_TPS2_VALOF
Pg_S5540.7 Terpenoid TPS medium pass TPS__00118__sp_G8H5N0_TPS17_SOLHA
Pg_S5643.4 Terpenoid TPS medium pass TPS__00047__sp_A0A4Y5QWA6_T18VF_CANSA
Pg_S5643.5 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
Pg_S5687.4 Terpenoid TPS low borderline TPS__00112__sp_G0Y7D3_TPS3_LITCU
Pg_S6491.1 Terpenoid TPS medium pass TPS__00057__sp_B0FGA9_GAS2_HELAN
Pg_S6548.3 Terpenoid TPS medium pass TPS__00076__sp_D0UZK2_TPS1_CITSI
Pg_S6548.4 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
Pg_S7985.1 Terpenoid TPS medium pass TPS__00008__sp_A0A167V661_TPS8_CAMSI
Pg_S8690.1 Terpenoid TPS medium pass TPS__00112__sp_G0Y7D3_TPS3_LITCU
Pg_S8690.2 Terpenoid TPS medium pass TPS__00130__sp_J7LQ09_TPS7_PHYDL