PlantSME Plant secondary metabolism enzyme database

Panax ginseng (panax_ginseng)

Imported from atlas release summary for Panax ginseng.

2784
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 874 20 BAHD (314) View species results
Alkaloid pathway 578 21 7DLGT (117) View species results
Phenylpropanoid pathway 553 13 POD (226) View species results
Flavonoid pathway 343 12 UFGT (219) View species results
Rosmarinic acid pathway 254 7 C4H (95) View species results
Steroid pathway 182 12 CAS (87) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2508 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 556 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Pg_S2820.2 Alkaloid 7DLGT low borderline
Pg_S2820.3 Alkaloid 7DLGT low borderline
Pg_S2820.9 Alkaloid 7DLGT low borderline
Pg_S2830.2 Alkaloid 7DLGT low borderline
Pg_S2880.1 Alkaloid 7DLGT low borderline
Pg_S2902.13 Alkaloid 7DLGT low borderline
Pg_S2973.2 Alkaloid 7DLGT medium pass
Pg_S3014.11 Alkaloid 7DLGT low borderline
Pg_S3014.12 Alkaloid 7DLGT medium pass
Pg_S3014.13 Alkaloid 7DLGT medium pass
Pg_S3039.16 Alkaloid 7DLGT medium pass
Pg_S3039.18 Alkaloid 7DLGT medium pass
Pg_S3083.28 Alkaloid 7DLGT high pass
Pg_S3083.6 Alkaloid 7DLGT low borderline
Pg_S3086.8 Alkaloid 7DLGT low borderline
Pg_S3132.10 Alkaloid 7DLGT medium pass
Pg_S3238.1 Alkaloid 7DLGT low borderline
Pg_S3247.12 Alkaloid 7DLGT low borderline
Pg_S3352.4 Alkaloid 7DLGT low borderline
Pg_S3353.12 Alkaloid 7DLGT low borderline
Pg_S3488.6 Alkaloid 7DLGT low borderline
Pg_S3511.2 Alkaloid 7DLGT low borderline
Pg_S3550.11 Alkaloid 7DLGT low borderline
Pg_S3615.9 Alkaloid 7DLGT low borderline
Pg_S3672.11 Alkaloid 7DLGT low borderline
Pg_S3672.12 Alkaloid 7DLGT low borderline
Pg_S3672.9 Alkaloid 7DLGT medium pass
Pg_S3750.2 Alkaloid 7DLGT low borderline
Pg_S3830.22 Alkaloid 7DLGT low borderline
Pg_S3920.12 Alkaloid 7DLGT low borderline
Pg_S3920.5 Alkaloid 7DLGT low borderline
Pg_S3920.6 Alkaloid 7DLGT medium pass
Pg_S3998.14 Alkaloid 7DLGT low borderline
Pg_S4014.13 Alkaloid 7DLGT low borderline
Pg_S4024.2 Alkaloid 7DLGT medium pass
Pg_S4156.8 Alkaloid 7DLGT medium pass
Pg_S4157.3 Alkaloid 7DLGT low borderline
Pg_S4157.4 Alkaloid 7DLGT low borderline
Pg_S4174.10 Alkaloid 7DLGT medium pass
Pg_S4174.6 Alkaloid 7DLGT medium pass
Pg_S4174.7 Alkaloid 7DLGT medium pass
Pg_S4174.8 Alkaloid 7DLGT medium pass
Pg_S4174.9 Alkaloid 7DLGT low borderline
Pg_S4215.3 Alkaloid 7DLGT medium pass
Pg_S4418.12 Alkaloid 7DLGT low borderline
Pg_S4493.1 Alkaloid 7DLGT medium pass
Pg_S4530.15 Alkaloid 7DLGT medium pass
Pg_S4530.16 Alkaloid 7DLGT low borderline
Pg_S4530.19 Alkaloid 7DLGT medium pass
Pg_S4530.20 Alkaloid 7DLGT medium pass