PlantSME Plant secondary metabolism enzyme database

Polytrichum commune (polytrichum_commune)

Imported from atlas release summary for Polytrichum commune.

606
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 153 11 POD (64) View species results
Terpenoid pathway 151 18 BAHD (58) View species results
Alkaloid pathway 128 16 NMT (20) View species results
Flavonoid pathway 75 8 UFGT (29) View species results
Rosmarinic acid pathway 66 7 C4H (33) View species results
Steroid pathway 33 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 753 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
POcom1210016430 Rosmarinic Acid 4CL medium pass
POcom1550022140 Rosmarinic Acid 4CL medium pass
POcom1910034750 Rosmarinic Acid 4CL medium pass
POcom2090041490 Rosmarinic Acid 4CL low borderline
POcom2440063000 Rosmarinic Acid 4CL low borderline
POcom2500066820 Rosmarinic Acid 4CL medium pass
POcom2500067280 Rosmarinic Acid 4CL low borderline
POcom2670089500 Rosmarinic Acid 4CL low borderline
POcom457650095670 Rosmarinic Acid 4CL medium pass
POcom628900102730 Rosmarinic Acid 4CL medium pass
POcom660108650 Rosmarinic Acid 4CL medium pass
POcom660108780 Rosmarinic Acid 4CL low borderline
POcom727730123560 Rosmarinic Acid 4CL low borderline
POcom733500124480 Rosmarinic Acid 4CL low borderline
POcom801060135520 Rosmarinic Acid 4CL low borderline
POcom801930136090 Rosmarinic Acid 4CL low borderline
POcom807220140040 Rosmarinic Acid 4CL low borderline
POcom814410171020 Rosmarinic Acid 4CL medium pass
POcom814630174020 Rosmarinic Acid 4CL low borderline
POcom814630174040 Rosmarinic Acid 4CL medium pass
POcom816670198520 Rosmarinic Acid 4CL low borderline
POcom817380213310 Rosmarinic Acid 4CL medium pass
POcom817490217830 Rosmarinic Acid 4CL low borderline
POcom817850225760 Rosmarinic Acid 4CL medium pass
POcom817850226590 Rosmarinic Acid 4CL medium pass
POcom817850226610 Rosmarinic Acid 4CL medium pass
POcom818030234090 Rosmarinic Acid 4CL low borderline
POcom890246370 Rosmarinic Acid 4CL low borderline
POcom906120248310 Rosmarinic Acid 4CL medium pass
POcom906130248340 Rosmarinic Acid 4CL medium pass
POcom940251060 Rosmarinic Acid 4CL low borderline
POcom1030007670 Rosmarinic Acid C4H medium pass
POcom1030007690 Rosmarinic Acid C4H low borderline
POcom1050011440 Rosmarinic Acid C4H medium pass
POcom1050011910 Rosmarinic Acid C4H low borderline
POcom1152300015260 Rosmarinic Acid C4H low borderline
POcom1152310015310 Rosmarinic Acid C4H low borderline
POcom1279410017050 Rosmarinic Acid C4H low borderline
POcom1279420017060 Rosmarinic Acid C4H low borderline
POcom1370018620 Rosmarinic Acid C4H medium pass
POcom1420019560 Rosmarinic Acid C4H low borderline
POcom1420019880 Rosmarinic Acid C4H low borderline
POcom1420020110 Rosmarinic Acid C4H low borderline
POcom1420020120 Rosmarinic Acid C4H medium pass
POcom1420020130 Rosmarinic Acid C4H low borderline
POcom1640024930 Rosmarinic Acid C4H low borderline
POcom1650025130 Rosmarinic Acid C4H medium pass
POcom1670026330 Rosmarinic Acid C4H low borderline
POcom2110042270 Rosmarinic Acid C4H low borderline
POcom2190046270 Rosmarinic Acid C4H medium pass