PlantSME Plant secondary metabolism enzyme database

Polytrichum commune (polytrichum_commune)

Imported from atlas release summary for Polytrichum commune.

606
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 153 11 POD (64) View species results
Terpenoid pathway 151 18 BAHD (58) View species results
Alkaloid pathway 128 16 NMT (20) View species results
Flavonoid pathway 75 8 UFGT (29) View species results
Rosmarinic acid pathway 66 7 C4H (33) View species results
Steroid pathway 33 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 753 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
POcom2280049460 Rosmarinic Acid C4H medium pass
POcom2290050090 Rosmarinic Acid C4H medium pass
POcom2310052050 Rosmarinic Acid C4H medium pass
POcom2340053520 Rosmarinic Acid C4H low borderline
POcom2340054320 Rosmarinic Acid C4H low borderline
POcom2370057200 Rosmarinic Acid C4H low borderline
POcom2370057470 Rosmarinic Acid C4H low borderline
POcom2370057480 Rosmarinic Acid C4H low borderline
POcom2380058400 Rosmarinic Acid C4H low borderline
POcom2480065860 Rosmarinic Acid C4H medium pass
POcom2480065890 Rosmarinic Acid C4H low borderline
POcom2480066030 Rosmarinic Acid C4H low borderline
POcom2500067440 Rosmarinic Acid C4H medium pass
POcom2520070080 Rosmarinic Acid C4H low borderline
POcom2580076070 Rosmarinic Acid C4H medium pass
POcom2580076620 Rosmarinic Acid C4H low borderline
POcom2600079140 Rosmarinic Acid C4H low borderline
POcom2600079300 Rosmarinic Acid C4H low borderline
POcom2610080300 Rosmarinic Acid C4H low borderline
POcom2610080330 Rosmarinic Acid C4H low borderline
POcom2630083050 Rosmarinic Acid C4H medium pass
POcom2660086680 Rosmarinic Acid C4H low borderline
POcom2660086700 Rosmarinic Acid C4H medium pass
POcom2670088110 Rosmarinic Acid C4H medium pass
POcom2670088190 Rosmarinic Acid C4H medium pass
POcom2670091400 Rosmarinic Acid C4H medium pass
POcom464340096300 Rosmarinic Acid C4H low borderline
POcom473990097460 Rosmarinic Acid C4H low borderline
POcom612170102130 Rosmarinic Acid C4H low borderline
POcom640102950 Rosmarinic Acid C4H low borderline
POcom651180108270 Rosmarinic Acid C4H low borderline
POcom680113800 Rosmarinic Acid C4H medium pass
POcom680113810 Rosmarinic Acid C4H medium pass
POcom700117300 Rosmarinic Acid C4H medium pass
POcom700117420 Rosmarinic Acid C4H low borderline
POcom700117430 Rosmarinic Acid C4H low borderline
POcom789090131540 Rosmarinic Acid C4H low borderline
POcom799490134420 Rosmarinic Acid C4H low borderline
POcom809420142250 Rosmarinic Acid C4H low borderline
POcom810550144960 Rosmarinic Acid C4H low borderline
POcom810570145180 Rosmarinic Acid C4H medium pass
POcom810570145190 Rosmarinic Acid C4H medium pass
POcom810570145390 Rosmarinic Acid C4H low borderline
POcom813700160960 Rosmarinic Acid C4H low borderline
POcom813700161390 Rosmarinic Acid C4H low borderline
POcom814040165120 Rosmarinic Acid C4H low borderline
POcom814050165590 Rosmarinic Acid C4H low borderline
POcom814280167980 Rosmarinic Acid C4H low borderline
POcom814350169990 Rosmarinic Acid C4H low borderline
POcom814350170000 Rosmarinic Acid C4H low borderline