PlantSME Plant secondary metabolism enzyme database

Polytrichum commune (polytrichum_commune)

Imported from atlas release summary for Polytrichum commune.

606
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 153 11 POD (64) View species results
Terpenoid pathway 151 18 BAHD (58) View species results
Alkaloid pathway 128 16 NMT (20) View species results
Flavonoid pathway 75 8 UFGT (29) View species results
Rosmarinic acid pathway 66 7 C4H (33) View species results
Steroid pathway 33 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 753 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
POcom473990097460 Steroid BR6OX1/CYP85A1 low borderline
POcom670111240 Steroid BR6OX1/CYP85A1 medium borderline
POcom680113810 Steroid BR6OX1/CYP85A1 medium borderline
POcom789090131540 Steroid BR6OX1/CYP85A1 medium borderline
POcom789940131580 Steroid BR6OX1/CYP85A1 low borderline
POcom814040165120 Steroid BR6OX1/CYP85A1 low borderline
POcom814440171760 Steroid BR6OX1/CYP85A1 low borderline
POcom815010177500 Steroid BR6OX1/CYP85A1 medium borderline
POcom815500183730 Steroid BR6OX1/CYP85A1 medium borderline
POcom815590185720 Steroid BR6OX1/CYP85A1 low borderline
POcom815840191940 Steroid BR6OX1/CYP85A1 medium borderline
POcom817460215910 Steroid BR6OX1/CYP85A1 low borderline
POcom817500218330 Steroid BR6OX1/CYP85A1 low borderline
POcom846390241160 Steroid BR6OX1/CYP85A1 low borderline
POcom950252380 Steroid BR6OX1/CYP85A1 low borderline
POcom980256660 Steroid BR6OX1/CYP85A1 medium borderline
POcom1030007670 Steroid BR6OX2/CYP85A2 low borderline
POcom1050011440 Steroid BR6OX2/CYP85A2 low borderline
POcom1050011910 Steroid BR6OX2/CYP85A2 low borderline
POcom1152300015260 Steroid BR6OX2/CYP85A2 low borderline
POcom1152310015310 Steroid BR6OX2/CYP85A2 low borderline
POcom1420019560 Steroid BR6OX2/CYP85A2 medium borderline
POcom1420019880 Steroid BR6OX2/CYP85A2 low borderline
POcom1420020130 Steroid BR6OX2/CYP85A2 low borderline
POcom1640024930 Steroid BR6OX2/CYP85A2 low borderline
POcom1650025130 Steroid BR6OX2/CYP85A2 low borderline
POcom2290050090 Steroid BR6OX2/CYP85A2 low borderline
POcom2310052050 Steroid BR6OX2/CYP85A2 low borderline
POcom2340054320 Steroid BR6OX2/CYP85A2 low borderline
POcom2370057470 Steroid BR6OX2/CYP85A2 low borderline
POcom2370057480 Steroid BR6OX2/CYP85A2 low borderline
POcom2520070080 Steroid BR6OX2/CYP85A2 low borderline
POcom2660086700 Steroid BR6OX2/CYP85A2 low borderline
POcom2670088110 Steroid BR6OX2/CYP85A2 low borderline
POcom2670091400 Steroid BR6OX2/CYP85A2 low borderline
POcom799490134420 Steroid BR6OX2/CYP85A2 low borderline
POcom805110137900 Steroid BR6OX2/CYP85A2 low borderline
POcom810550144960 Steroid BR6OX2/CYP85A2 low borderline
POcom810570145180 Steroid BR6OX2/CYP85A2 low borderline
POcom810570145190 Steroid BR6OX2/CYP85A2 low borderline
POcom813700160960 Steroid BR6OX2/CYP85A2 low borderline
POcom814050165590 Steroid BR6OX2/CYP85A2 low borderline
POcom815560184870 Steroid BR6OX2/CYP85A2 low borderline
POcom815810191050 Steroid BR6OX2/CYP85A2 low borderline
POcom815810191060 Steroid BR6OX2/CYP85A2 low borderline
POcom815810191250 Steroid BR6OX2/CYP85A2 low borderline
POcom815840192120 Steroid BR6OX2/CYP85A2 medium borderline
POcom816100193950 Steroid BR6OX2/CYP85A2 low borderline
POcom816100193980 Steroid BR6OX2/CYP85A2 low borderline
POcom817080206880 Steroid BR6OX2/CYP85A2 low borderline