PlantSME Plant secondary metabolism enzyme database

Polytrichum commune (polytrichum_commune)

Imported from atlas release summary for Polytrichum commune.

606
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 153 11 POD (64) View species results
Terpenoid pathway 151 18 BAHD (58) View species results
Alkaloid pathway 128 16 NMT (20) View species results
Flavonoid pathway 75 8 UFGT (29) View species results
Rosmarinic acid pathway 66 7 C4H (33) View species results
Steroid pathway 33 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 753 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
POcom817690223000 Steroid BR6OX2/CYP85A2 low borderline
POcom817880228870 Steroid BR6OX2/CYP85A2 low borderline
POcom890246400 Steroid BR6OX2/CYP85A2 low borderline
POcom920249500 Steroid BR6OX2/CYP85A2 low borderline
POcom970255030 Steroid BR6OX2/CYP85A2 low borderline
POcom1810028030 Steroid CAS medium pass
POcom1910034040 Steroid CAS medium pass
POcom802250136230 Steroid CAS medium pass
POcom812970154250 Steroid CAS medium pass
POcom812970154260 Steroid CAS medium pass
POcom815330182060 Steroid CAS medium pass
POcom815330182150 Steroid CAS medium pass
POcom817180208620 Steroid CAS medium pass
POcom1420020120 Steroid CPD/CYP90A1 medium borderline
POcom2110042270 Steroid CPD/CYP90A1 medium borderline
POcom2370057200 Steroid CPD/CYP90A1 medium borderline
POcom2480065890 Steroid CPD/CYP90A1 medium borderline
POcom2600079140 Steroid CPD/CYP90A1 medium borderline
POcom2600079300 Steroid CPD/CYP90A1 medium borderline
POcom813750162200 Steroid CPD/CYP90A1 low borderline
POcom813960163620 Steroid CPD/CYP90A1 low borderline
POcom960253830 Steroid CPD/CYP90A1 medium borderline
POcom2700094640 Steroid CPI1 high pass
POcom680113800 Steroid CYP51G1 medium borderline
POcom814350169990 Steroid CYP51G1 medium borderline
POcom817570219920 Steroid CYP51G1 medium borderline
POcom2190046270 Steroid CYP90D1 low borderline
POcom2500067440 Steroid CYP90D1 low borderline
POcom809420142250 Steroid CYP90D1 low borderline
POcom815790190040 Steroid CYP90D1 low borderline
POcom816190195630 Steroid CYP90D1 low borderline
POcom830239400 Steroid CYP90D1 low borderline
POcom830239430 Steroid CYP90D1 low borderline
POcom920249400 Steroid CYP90D1 medium borderline
POcom980256460 Steroid CYP90D1 low borderline
POcom980256710 Steroid CYP90D1 low borderline
POcom2170044980 Steroid DET2 low borderline
POcom2670090120 Steroid DET2 low borderline
POcom2600079480 Steroid DWF1 medium pass
POcom2600079490 Steroid DWF1 medium pass
POcom729970123670 Steroid DWF1 medium pass
POcom812560151830 Steroid DWF1 medium pass
POcom1050011900 Steroid DWF4/CYP90B1 low borderline
POcom1279410017050 Steroid DWF4/CYP90B1 low borderline
POcom1279420017060 Steroid DWF4/CYP90B1 low borderline
POcom1370018620 Steroid DWF4/CYP90B1 low borderline
POcom1420020110 Steroid DWF4/CYP90B1 low borderline
POcom1670026330 Steroid DWF4/CYP90B1 low borderline
POcom2130042990 Steroid DWF4/CYP90B1 medium borderline
POcom2280049460 Steroid DWF4/CYP90B1 low borderline