PlantSME Plant secondary metabolism enzyme database

Polytrichum commune (polytrichum_commune)

Imported from atlas release summary for Polytrichum commune.

606
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 153 11 POD (64) View species results
Terpenoid pathway 151 18 BAHD (58) View species results
Alkaloid pathway 128 16 NMT (20) View species results
Flavonoid pathway 75 8 UFGT (29) View species results
Rosmarinic acid pathway 66 7 C4H (33) View species results
Steroid pathway 33 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 753 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
POcom2340053520 Steroid DWF4/CYP90B1 low borderline
POcom2380058400 Steroid DWF4/CYP90B1 low borderline
POcom2480065860 Steroid DWF4/CYP90B1 low borderline
POcom2480066030 Steroid DWF4/CYP90B1 low borderline
POcom2550072980 Steroid DWF4/CYP90B1 medium borderline
POcom2580076070 Steroid DWF4/CYP90B1 medium borderline
POcom2580076620 Steroid DWF4/CYP90B1 low borderline
POcom2610080300 Steroid DWF4/CYP90B1 medium pass
POcom2610080330 Steroid DWF4/CYP90B1 low borderline
POcom2610080820 Steroid DWF4/CYP90B1 low borderline
POcom2630083050 Steroid DWF4/CYP90B1 low borderline
POcom2670088190 Steroid DWF4/CYP90B1 medium borderline
POcom464340096300 Steroid DWF4/CYP90B1 low borderline
POcom612170102130 Steroid DWF4/CYP90B1 low borderline
POcom640102950 Steroid DWF4/CYP90B1 low borderline
POcom651180108270 Steroid DWF4/CYP90B1 low borderline
POcom700117300 Steroid DWF4/CYP90B1 low borderline
POcom700117420 Steroid DWF4/CYP90B1 low borderline
POcom710121060 Steroid DWF4/CYP90B1 medium borderline
POcom710121070 Steroid DWF4/CYP90B1 medium borderline
POcom715260123000 Steroid DWF4/CYP90B1 low borderline
POcom810570145390 Steroid DWF4/CYP90B1 low borderline
POcom813700161390 Steroid DWF4/CYP90B1 low borderline
POcom814280167980 Steroid DWF4/CYP90B1 low borderline
POcom814580173010 Steroid DWF4/CYP90B1 low borderline
POcom814960177210 Steroid DWF4/CYP90B1 low borderline
POcom815010177440 Steroid DWF4/CYP90B1 low borderline
POcom815400182640 Steroid DWF4/CYP90B1 low borderline
POcom816100194010 Steroid DWF4/CYP90B1 low borderline
POcom816190195640 Steroid DWF4/CYP90B1 low borderline
POcom816190195650 Steroid DWF4/CYP90B1 low borderline
POcom817000205750 Steroid DWF4/CYP90B1 low borderline
POcom817030206210 Steroid DWF4/CYP90B1 low borderline
POcom817150207750 Steroid DWF4/CYP90B1 low borderline
POcom817240208890 Steroid DWF4/CYP90B1 low borderline
POcom817240208900 Steroid DWF4/CYP90B1 low borderline
POcom818060235740 Steroid DWF4/CYP90B1 low borderline
POcom818080236550 Steroid DWF4/CYP90B1 low borderline
POcom890246170 Steroid DWF4/CYP90B1 low borderline
POcom890246180 Steroid DWF4/CYP90B1 low borderline
POcom890246190 Steroid DWF4/CYP90B1 low borderline
POcom812610152270 Steroid DWF5 medium borderline
POcom814920176280 Steroid DWF5 medium pass
POcom817450215020 Steroid DWF5 medium pass
POcom1480021320 Steroid DWF7 medium pass
POcom2380058160 Steroid FK high pass
POcom2670088580 Steroid HYD1 high pass
POcom814920176290 Steroid ROT3/CYP90C1 low borderline
POcom920249410 Steroid ROT3/CYP90C1 low borderline
POcom920249420 Steroid ROT3/CYP90C1 medium borderline