PlantSME Plant secondary metabolism enzyme database

Polytrichum commune (polytrichum_commune)

Imported from atlas release summary for Polytrichum commune.

606
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 153 11 POD (64) View species results
Terpenoid pathway 151 18 BAHD (58) View species results
Alkaloid pathway 128 16 NMT (20) View species results
Flavonoid pathway 75 8 UFGT (29) View species results
Rosmarinic acid pathway 66 7 C4H (33) View species results
Steroid pathway 33 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 753 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
POcom890246190 Alkaloid 7DLH low borderline
POcom980256710 Alkaloid 7DLH medium borderline
POcom670110740 Alkaloid 8HGO medium borderline
POcom780130330 Alkaloid 8HGO medium borderline
POcom812550151460 Alkaloid 8HGO medium borderline
POcom815400182970 Alkaloid 8HGO medium borderline
POcom1040008340 Alkaloid ADC low borderline
POcom814770175360 Alkaloid ADC medium pass
POcom815990193660 Alkaloid ADC medium pass
POcom2520070050 Alkaloid BBE low borderline
POcom2560073710 Alkaloid BBE low borderline
POcom2560073750 Alkaloid BBE low borderline
POcom780130170 Alkaloid BBE low borderline
POcom812970154230 Alkaloid BBE low borderline
POcom816140194320 Alkaloid BBE low borderline
POcom980256380 Alkaloid BBE low borderline
POcom1030007400 Alkaloid CNMT low borderline
POcom1180015990 Alkaloid CNMT low borderline
POcom2430062730 Alkaloid CNMT low borderline
POcom640103760 Alkaloid CNMT low borderline
POcom800135020 Alkaloid CNMT low borderline
POcom814060165830 Alkaloid CNMT low borderline
POcom814580173620 Alkaloid CNMT medium borderline
POcom814960177240 Alkaloid CNMT low borderline
POcom817410214350 Alkaloid CNMT low borderline
POcom1830030040 Alkaloid CODM/T6ODM medium borderline
POcom2340054660 Alkaloid CODM/T6ODM medium borderline
POcom2350054680 Alkaloid CODM/T6ODM medium borderline
POcom2460063550 Alkaloid CODM/T6ODM medium borderline
POcom2670089020 Alkaloid CODM/T6ODM medium borderline
POcom2670089040 Alkaloid CODM/T6ODM medium borderline
POcom2670089050 Alkaloid CODM/T6ODM medium borderline
POcom640103860 Alkaloid CODM/T6ODM medium borderline
POcom700117940 Alkaloid CODM/T6ODM medium borderline
POcom720123200 Alkaloid CODM/T6ODM medium borderline
POcom807660140460 Alkaloid CODM/T6ODM medium borderline
POcom810810145700 Alkaloid CODM/T6ODM medium borderline
POcom813390156940 Alkaloid CODM/T6ODM medium borderline
POcom813870162730 Alkaloid CODM/T6ODM medium borderline
POcom816190195420 Alkaloid CODM/T6ODM medium borderline
POcom816320196230 Alkaloid CODM/T6ODM medium borderline
POcom816320196280 Alkaloid CODM/T6ODM medium borderline
POcom816550197870 Alkaloid CODM/T6ODM medium borderline
POcom817150207980 Alkaloid CODM/T6ODM medium borderline
POcom817250211170 Alkaloid CODM/T6ODM medium borderline
POcom817500218450 Alkaloid CODM/T6ODM medium borderline
POcom817500218460 Alkaloid CODM/T6ODM medium borderline
POcom817680222540 Alkaloid CODM/T6ODM medium borderline
POcom817680222560 Alkaloid CODM/T6ODM medium borderline
POcom817850226830 Alkaloid CODM/T6ODM medium borderline