PlantSME Plant secondary metabolism enzyme database

Polytrichum commune (polytrichum_commune)

Imported from atlas release summary for Polytrichum commune.

606
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 153 11 POD (64) View species results
Terpenoid pathway 151 18 BAHD (58) View species results
Alkaloid pathway 128 16 NMT (20) View species results
Flavonoid pathway 75 8 UFGT (29) View species results
Rosmarinic acid pathway 66 7 C4H (33) View species results
Steroid pathway 33 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 753 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
POcom820238270 Alkaloid CODM/T6ODM medium borderline
POcom820238450 Alkaloid CODM/T6ODM medium borderline
POcom950252350 Alkaloid CODM/T6ODM medium borderline
POcom1830029840 Alkaloid COR low borderline
POcom2250048310 Alkaloid COR medium pass
POcom2460064220 Alkaloid COR medium pass
POcom740124760 Alkaloid COR medium pass
POcom817870228030 Alkaloid COR medium pass
POcom1050011910 Alkaloid CYP719 medium borderline
POcom1152300015260 Alkaloid CYP719 medium borderline
POcom1152310015310 Alkaloid CYP719 medium borderline
POcom814700174830 Alkaloid CYP719 medium borderline
POcom816750199680 Alkaloid CYP719 low borderline
POcom817500218330 Alkaloid CYP719 medium borderline
POcom818060235740 Alkaloid CYP719 medium borderline
POcom1420020130 Alkaloid CYP80B1 medium borderline
POcom2370057480 Alkaloid CYP80B1 medium borderline
POcom2600079290 Alkaloid CYP80B1 medium borderline
POcom710119590 Alkaloid CYP80B1 low borderline
POcom710119610 Alkaloid CYP80B1 medium borderline
POcom814050165590 Alkaloid CYP80B1 medium borderline
POcom814350170000 Alkaloid CYP80B1 medium borderline
POcom815840191940 Alkaloid CYP80B1 medium borderline
POcom814040165110 Alkaloid CYP80F1 medium borderline
POcom816140194530 Alkaloid CYP80F1 low borderline
POcom1030007690 Alkaloid G8O/G8H low borderline
POcom1420019880 Alkaloid G8O/G8H medium borderline
POcom2340054320 Alkaloid G8O/G8H medium borderline
POcom2370057470 Alkaloid G8O/G8H medium borderline
POcom2380058400 Alkaloid G8O/G8H medium borderline
POcom2660086680 Alkaloid G8O/G8H low borderline
POcom670111240 Alkaloid G8O/G8H medium borderline
POcom690115570 Alkaloid G8O/G8H low borderline
POcom789090131540 Alkaloid G8O/G8H medium borderline
POcom799490134420 Alkaloid G8O/G8H medium borderline
POcom810550144960 Alkaloid G8O/G8H medium borderline
POcom813700160960 Alkaloid G8O/G8H medium borderline
POcom814050165570 Alkaloid G8O/G8H low borderline
POcom814350169990 Alkaloid G8O/G8H medium borderline
POcom814660174390 Alkaloid G8O/G8H low borderline
POcom817080206880 Alkaloid G8O/G8H medium borderline
POcom817460215910 Alkaloid G8O/G8H medium borderline
POcom1540022020 Alkaloid GS high pass
POcom1550022100 Alkaloid GS high pass
POcom1830029010 Alkaloid GS medium pass
POcom1830029260 Alkaloid GS low borderline
POcom1860030620 Alkaloid GS low borderline
POcom1910034370 Alkaloid GS medium pass
POcom2040038720 Alkaloid GS low borderline
POcom2170044840 Alkaloid GS low borderline