PlantSME Plant secondary metabolism enzyme database

Ptychomnion cygnisetum (ptychomnion_cygnisetum)

Imported from atlas release summary for Ptychomnion cygnisetum.

596
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 156 11 POD (81) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 129 18 NMT (25) View species results
Flavonoid pathway 79 10 UFGT (25) View species results
Rosmarinic acid pathway 52 7 C4H (23) View species results
Steroid pathway 39 13 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 636 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 110 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Pcyg2780490127820 Alkaloid GS low borderline
Pcyg2784670130240 Alkaloid GS low borderline
Pcyg2789830136210 Alkaloid GS low borderline
Pcyg2793580140520 Alkaloid GS medium pass
Pcyg2795020141240 Alkaloid GS low borderline
Pcyg2803130144090 Alkaloid GS medium pass
Pcyg2803560144200 Alkaloid GS medium pass
Pcyg2830830145500 Alkaloid GS low borderline
Pcyg2833620146840 Alkaloid GS low borderline
Pcyg2838220150930 Alkaloid GS low borderline
Pcyg2839310153040 Alkaloid GS low borderline
Pcyg2846760157600 Alkaloid GS low borderline
Pcyg2852020160320 Alkaloid GS low borderline
Pcyg2876210179470 Alkaloid GS medium pass
Pcyg2880990181010 Alkaloid GS medium pass
Pcyg2896810189770 Alkaloid GS low borderline
Pcyg2897200189890 Alkaloid GS medium pass
Pcyg2903250193130 Alkaloid GS low borderline
Pcyg2903950194500 Alkaloid GS low borderline
Pcyg2906940198220 Alkaloid GS low borderline
Pcyg2914910202940 Alkaloid GS low borderline
Pcyg2921630206790 Alkaloid GS medium pass
Pcyg2922610207600 Alkaloid GS high pass
Pcyg2922620207680 Alkaloid GS low borderline
Pcyg2927090210830 Alkaloid GS low borderline
Pcyg2927870211510 Alkaloid GS low borderline
Pcyg2940040218320 Alkaloid GS medium pass
Pcyg2949680224080 Alkaloid GS low borderline
Pcyg2957600226790 Alkaloid GS low borderline
Pcyg2958280227160 Alkaloid GS medium pass
Pcyg1837810003920 Alkaloid H6H medium borderline
Pcyg1894810011170 Alkaloid H6H medium pass
Pcyg2511190072570 Alkaloid H6H medium borderline
Pcyg2511220072790 Alkaloid H6H medium pass
Pcyg2788540131760 Alkaloid H6H low borderline
Pcyg2863450165940 Alkaloid H6H low borderline
Pcyg2871360173880 Alkaloid H6H low borderline
Pcyg2905400196610 Alkaloid H6H low borderline
Pcyg2907760198300 Alkaloid H6H low borderline
Pcyg2908840200380 Alkaloid H6H medium borderline
Pcyg1776010000780 Alkaloid IO medium borderline
Pcyg1835400003120 Alkaloid IO medium borderline
Pcyg1893420009270 Alkaloid IO medium borderline
Pcyg1898560013370 Alkaloid IO medium borderline
Pcyg2173760031000 Alkaloid IO medium borderline
Pcyg2382750052600 Alkaloid IO low borderline
Pcyg2383000052800 Alkaloid IO medium borderline
Pcyg2385740054960 Alkaloid IO medium borderline
Pcyg2513670077440 Alkaloid IO medium borderline
Pcyg2655630088580 Alkaloid IO medium borderline