PlantSME Plant secondary metabolism enzyme database

Ptychomnion cygnisetum (ptychomnion_cygnisetum)

Imported from atlas release summary for Ptychomnion cygnisetum.

596
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 156 11 POD (81) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 129 18 NMT (25) View species results
Flavonoid pathway 79 10 UFGT (25) View species results
Rosmarinic acid pathway 52 7 C4H (23) View species results
Steroid pathway 39 13 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 636 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 110 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Pcyg2764870110790 Alkaloid IO medium borderline
Pcyg2793010140470 Alkaloid IO low borderline
Pcyg2838400152170 Alkaloid IO medium borderline
Pcyg2846260157050 Alkaloid IO medium borderline
Pcyg2862270163370 Alkaloid IO medium borderline
Pcyg2863680167080 Alkaloid IO medium borderline
Pcyg2872930177630 Alkaloid IO medium borderline
Pcyg2880990181020 Alkaloid IO medium borderline
Pcyg2921690206830 Alkaloid IO medium borderline
Pcyg2922480207190 Alkaloid IO medium borderline
Pcyg2929240212800 Alkaloid IO medium borderline
Pcyg2954210225130 Alkaloid IO medium borderline
Pcyg2871830175190 Alkaloid ISY medium pass
Pcyg2234240044480 Alkaloid LAMT medium borderline
Pcyg2455260065810 Alkaloid LAMT medium borderline
Pcyg2835010148190 Alkaloid LAMT medium borderline
Pcyg2848580158800 Alkaloid LAMT medium borderline
Pcyg2890560184170 Alkaloid LAMT low borderline
Pcyg2514160078240 Alkaloid MPO low borderline
Pcyg2547500083110 Alkaloid MPO low borderline
Pcyg2860670161160 Alkaloid MPO high pass
Pcyg2869260172730 Alkaloid MPO low borderline
Pcyg1805890000840 Alkaloid NCS medium borderline
Pcyg1909930016990 Alkaloid NCS medium borderline
Pcyg2393110062030 Alkaloid NCS low borderline
Pcyg2393110062080 Alkaloid NCS low borderline
Pcyg2519680079400 Alkaloid NCS low borderline
Pcyg2650860086190 Alkaloid NCS medium borderline
Pcyg2770330118490 Alkaloid NCS medium borderline
Pcyg2871360173870 Alkaloid NCS medium borderline
Pcyg2891650185800 Alkaloid NCS low borderline
Pcyg2920780206380 Alkaloid NCS low borderline
Pcyg1834610002850 Alkaloid NMT low borderline
Pcyg1861460005550 Alkaloid NMT low borderline
Pcyg1893320008850 Alkaloid NMT low borderline
Pcyg1894070010400 Alkaloid NMT medium pass
Pcyg1894250010720 Alkaloid NMT low borderline
Pcyg1896040012520 Alkaloid NMT medium pass
Pcyg1907980016360 Alkaloid NMT medium borderline
Pcyg1908120016530 Alkaloid NMT low borderline
Pcyg1973680023520 Alkaloid NMT medium borderline
Pcyg2143550025650 Alkaloid NMT low borderline
Pcyg2157920026030 Alkaloid NMT low borderline
Pcyg2251360046330 Alkaloid NMT low borderline
Pcyg2262450047110 Alkaloid NMT low borderline
Pcyg2381540050560 Alkaloid NMT medium borderline
Pcyg2382660052460 Alkaloid NMT medium borderline
Pcyg2384430053820 Alkaloid NMT medium borderline
Pcyg2385870055570 Alkaloid NMT medium pass
Pcyg2513670077430 Alkaloid NMT low borderline